Sulfurimonas aquatica: GJV85_11235
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Entry
GJV85_11235 CDS
T08902
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
saqt
Sulfurimonas aquatica
Pathway
saqt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saqt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GJV85_11235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saqt03019
]
GJV85_11235
03009 Ribosome biogenesis [BR:
saqt03009
]
GJV85_11235
Enzymes [BR:
saqt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GJV85_11235
Messenger RNA biogenesis [BR:
saqt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GJV85_11235
Ribosome biogenesis [BR:
saqt03009
]
Prokaryotic type
rRNA helicases
GJV85_11235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QSZ42658
UniProt:
A0A975B1Z0
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All DBs
Position
2331501..2333090
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AA seq
529 aa
AA seq
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MQENAQTQQPQTEAPEVEEKLLTFDELGLKPELLKSVKFAGFTTPSPIQAQAIPVVIAGK
DMVGQAHTGTGKTAAFSLPALHNMKLDGSVELLVITPTRELATQVSDEIFKYGRNLGAKT
VTVFGGSSYKRQLDLIARGASVVVATPGRMLDILKRGMIPDFAPSTVVLDEADEMLDMGF
LDDINEIFTYLPSNRQTLLFSATMPAPIKTLASRILKDPAFISITKGETTNTDIEQEYYV
IDEHERDDAIIRLMDSETTDKSIVFCRTKSEVDRLSNVLSNAGYLANGLHGDMEQRQRET
VIKGFKQNSVKVLVATDVAARGIHVNNISHVFNYHIPFDPESYVHRIGRTGRAGTKGKAI
TLLTPLEFKELQRIKQKVGTSMAHAFVPSKNDLRSSTIDTMVKTIEDQHIYDEAHKVLDR
LKEDIDEETIMYKLISMILDKQDIKGPSNIGIPADKLDAILARAAQRGGGNSRGYRGNRN
RSGGGGGGGNRSRSGGGGGGYRGNKEGGSGDRNRSGGGRSSGGYKGNRD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaatgcacaaacgcaacaaccacaaacagaggccccagaagtagaagaaaaa
cttttaacttttgatgagttaggtttaaaaccagagttattaaaaagtgtaaaattcgca
gggtttacaactccatctcctattcaagcacaagctatccccgttgttattgctggaaaa
gacatggttggacaagctcacacaggtacaggtaaaactgccgcttttagtttaccagct
cttcacaatatgaaactagacggttcagttgaactacttgttataacgccaacgcgtgaa
cttgctacacaagtaagtgatgaaatatttaagtatggtagaaacttaggagctaaaact
gtaacagtatttggtggtagctcatacaaacgccaactcgatctaatagctcgtggagct
tcagttgtagttgctactcctggacgtatgctagacattcttaaacgcggaatgattcct
gactttgcaccatcaacagtagttcttgatgaagctgatgagatgctagatatgggattt
ttggatgatatcaatgaaattttcacatatcttccatcaaaccgtcagactctacttttc
tcagctactatgccagcacccattaaaacgctagcgagtagaattttaaaagaccctgcg
tttatatctatcactaagggtgaaactacaaatactgatattgaacaagagtactatgtg
atagatgagcatgagcgtgatgatgctatcattcgtcttatggactcagagactacagat
aagtcaatagtattttgtagaacaaaatctgaagtagatagactaagcaatgttctttca
aatgctggatacttagcaaatggacttcatggagatatggagcaacgccaacgtgagact
gtaattaaaggtttcaaacaaaactcagtaaaagtacttgttgctactgatgttgcagca
cgtggtatacatgtaaataatatctctcatgtatttaactaccatattccatttgaccct
gagtcttatgttcaccgtatcggtagaactggtcgtgctggaactaagggtaaggctata
acgcttcttactccattagagtttaaagaacttcagcgtattaagcaaaaagttggaact
tcaatggctcatgcttttgttccaagtaagaatgacctaagaagctctactatcgataca
atggtaaaaactattgaagatcaacatatatatgatgaagcacataaagttcttgaccgt
cttaaagaagatatagatgaagagactattatgtataaacttatctctatgattttagat
aagcaagatatcaaagggccaagtaacattggtattcctgctgataaacttgacgctatt
ttagctcgcgctgctcaacgtggtggtggaaatagtcgtggataccgtggaaatagaaat
cgttctggtggcggaggtggtggcggaaaccgtagtcgttctggtggtggaggcggtgga
taccgtggaaacaaagaaggtggaagcggagatagaaatcgctctggcggtggaagaagt
tcaggtggttacaaaggtaaccgcgactaa
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