Streptomyces aquilus: EJC51_23830
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Entry
EJC51_23830 CDS
T07011
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
saqu
Streptomyces aquilus
Brite
KEGG Orthology (KO) [BR:
saqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saqu03019
]
EJC51_23830 (hrpA)
Enzymes [BR:
saqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EJC51_23830 (hrpA)
Messenger RNA biogenesis [BR:
saqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EJC51_23830 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_19
AAA_22
nSTAND3
NACHT
T2SSE
AAA_16
SLFN-g3_helicase
PhoH
TsaE
AAA_25
ResIII
MetJ
NTPase_1
Zeta_toxin
SRP54
Motif
Other DBs
NCBI-ProteinID:
AZP18837
UniProt:
A0A3S9I3B4
LinkDB
All DBs
Position
5210813..5214805
Genome browser
AA seq
1330 aa
AA seq
DB search
MSTHPAPAPGASDAPSLGALAPRLSELSLRDAHRIGRRLEGARKIRKPEARAAVLAEIEG
EVAKAEERMAGRRSRVPAVSYPEQLPVSQKKDEIADAIRDHQVVIVAGETGSGKTTQIPK
ICMELGRGVRGMIGHTQPRRIAARTVAERVAEELNTPLGEAVGWKVRFTDQVNPDATFIK
LMTDGILLAEIQTDRELRAYDTIIIDEAHERSLNIDFLLGYLAQLLPKRPDLKVVITSAT
IDPERFSRHFGDAPIVEVSGRTYPVEVRYRPLLEEDSDDADRDQITAICDAVEELQAEGK
GDILVFLSGEREIRDTADALNKRNYPRAGGANGQGTEVLPLYARLSHAEQHRVFQPHTGR
RIVLATNVAETSLTVPGIKYVIDPGFARISRYSHRTKVQRLPIEAISQASANQRKGRCGR
TSDGVCIRLYSEDDFLARPEFTDAEILRTNLASVILQMTAAGLGDIEKFPFIDPPDHRNI
RDGVQLLQELGALNPAEKDPRKRLTDTGRKLAQLPVDPRLARMVLEADKNGCVREVMVIA
AALSIQDPRERPADKQTQADQQHARFRDETSDFLAYLNLWRYVREQQKERGSSSFRRMCK
QEYLNFLRIREWQDIYTQLRTVAKQMGIHLNEEDAPDQSVHVSLLAGLLSHIGMKDVKDG
NKNEYLGARSAKFAIFPGSSLFKKQPRFVMSAELVETSRLWARVNAKIEPEWVEPLAEHL
LKRTYSEPHWEKDQAAVMAYEKVTLYGVPIVAQRKVNYGRIDPETSRELFIRNALVEGDW
RTHHKFYADNRRLLSEVEELEHRARRRDIVVDDDTLFDFYDQRVPEHVVSGAHFDSWWKR
KRHEQPDFLDFEREMLIRESAEAVTKADYPDSWRQGQLKFRVTYQFEPGADADGVTVHIP
LQVLNQVTDEGFDWQIPGLREEVVTELIRSLPKPIRRNYVPAPNFAKRFLDTAVPLQEPL
TTTMARELKRMVGVPFEAEDFDWSKIPDHLRITFRIVDERRRKLAEDKDLEALKLQLKPK
ARKALSQAAAATAERQGGESLERKGLTDWTIGTLTRVFETRRAGQPVKAYPALVDDGDTV
SVRLFDTEAEQAEAMWKGTRRLVLRNIPVNPAKFASDHLTNAQKLALSANPHGTIQALFD
DCAMAAADKLIGDFGGPAWDEESYRKLYDKVRAEIVDTTVRTVGQVQQVLAAWQACERRL
KGVRSPALLANLTDVRKQLDALVKPGFVTATGLRRLPDLMRYLVAADRRLQQMPTAVQRD
TTRMEKVHEMQDEYAWLLEQMPQGRPVPTAVLDIRWMIEELRVSYFAHALGTAYPISDKR
IVKAIDAAVP
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgcatcctgcccccgcccccggcgcctccgacgccccgagcctcggcgccctc
gccccccgcctgagcgagctgtccctgcgcgacgcgcaccggatcggccgccggctcgaa
ggtgcgcgcaagatccgcaagccggaggcccgtgccgccgtgctcgccgagatcgagggc
gaggtcgcgaaggccgaggaacgcatggccgggcggcgctcccgcgtgcccgccgtcagc
tatcccgagcagctcccggtcagccagaagaaggacgagatcgcggacgccatccgtgat
caccaggtcgtgatcgtggccggtgagaccgggtccggcaagacgacgcagatcccgaag
atctgcatggagctggggcgtggcgtccgcggcatgatcgggcacacgcagccccgtcgt
atcgccgcccggaccgtcgccgagcgcgtggccgaggagctgaacacccccctcggcgag
gccgtcggctggaaggtgcggttcaccgaccaggtgaacccggacgccaccttcatcaag
ctgatgacggacggcatcctgctcgccgagatccagaccgaccgcgagctgcgcgcctac
gacacgatcatcatcgacgaggcccacgagcggtccctcaacatcgacttcctgctcggc
tacctcgcccagctgctgccgaagcgcccggacctcaaggtcgtgatcacctccgcgacc
atcgaccccgagcgcttctcccggcacttcggggacgccccgatcgtcgaggtcagcggc
cggacctacccggtggaggtgcgctaccgcccgctgctcgaagaggactccgacgacgcc
gaccgcgaccagatcaccgcgatctgcgacgccgtcgaggagctccaggccgagggcaag
ggcgacatcctggtcttcctctccggcgagcgggagatccgcgacaccgcggacgcgctc
aacaagaggaactacccccgcgccggaggcgccaatgggcagggcacggaagtcctcccc
ctctacgcccggctctcgcacgccgagcagcaccgcgtcttccagccgcacaccggccgc
aggatcgttctggcgacgaacgtcgccgagacctcgctgaccgtcccgggcatcaagtac
gtcatcgacccgggcttcgcccgtatctcccgctacagccaccgcaccaaggtccagcgg
ctccccatcgaggcgatctcgcaggccagcgccaaccagcgcaagggccgctgcggccgt
acgtccgacggtgtctgcatccggctgtacagcgaggacgacttcctcgcccgcccggag
ttcaccgacgcggagatcctccgcacgaacctcgcctccgtcatcctccagatgaccgcg
gccggcctcggcgacatcgagaagttccccttcatcgacccgccggaccaccgcaacatc
cgcgacggcgtgcagctcctccaggagctcggcgcgctgaacccggccgagaaggacccg
cgcaagcggctcaccgacaccggccgcaagctcgcccagctgcccgtcgacccgcggctg
gcccgcatggtcctggaggccgacaagaacggctgtgtccgcgaggtcatggtcatagcg
gcggcgctgtccatccaggacccgcgtgagcgccccgccgacaagcagacccaggccgac
cagcagcacgcccgcttccgcgacgagaccagtgacttcctcgcctatctgaacctgtgg
cggtacgtccgcgagcagcagaaggagcggggttcgagttccttccgccggatgtgcaag
caggagtacctcaacttcctgcgcatccgcgagtggcaggacatctatacgcaactgcgt
accgtcgccaagcagatgggcatccatctgaacgaggaggacgcgccggaccagtccgtc
cacgtctccctcctcgccggccttctctcccacatcgggatgaaggacgtgaaggacggc
aacaagaacgagtacctgggcgcccgcagcgccaagttcgcgatcttcccgggctcgtcg
ctcttcaagaagcagccccgtttcgtcatgtcggcggaactggtggagacttcacgcctc
tgggcccgcgtcaacgccaagatcgagccggagtgggtcgagccgctcgccgagcacctg
ctgaagcggacgtactccgaaccgcactgggagaaggaccaggcggccgtgatggcgtac
gagaaggtcacgctgtacggcgtaccgatcgtcgcccagcgcaaggtcaactacggccgg
atcgacccggagacatcccgcgagcttttcatccgcaacgccctggtcgagggtgactgg
cgcacgcaccacaagttctacgccgacaaccgcaggctgctgagcgaggtcgaggagctc
gaacaccgggcccgccgccgggacatcgtcgtggacgacgacaccctcttcgacttctac
gaccagcgggtgcccgaacacgtcgtctccggcgcccacttcgactcctggtggaagcgc
aagcggcacgagcagcccgacttcctcgacttcgagcgggagatgctcatccgggagtcg
gcggaggcggtcaccaaggccgactatccggactcctggcggcaggggcagctgaagttc
cgggtcacctaccagttcgagccgggcgcggacgccgacggtgtcaccgtccacatcccg
ctccaggtcctcaaccaggtcacggacgagggcttcgactggcagatcccgggcctgcgc
gaggaggtcgtgacggagctgatccgctccctccccaagccgatccgccgcaactacgtc
ccggcgccgaacttcgccaaacgcttcctggacacggcggtccccctccaggagccgctg
acgaccaccatggcccgcgagctcaagcgcatggtcggggtgcccttcgaggccgaggac
ttcgactggtcgaagatcccggaccacctgcgcatcaccttccggatcgtcgacgagcgg
cgccgcaagctggccgaggacaaggatctggaggcgctgaagctccagctgaagccgaag
gcgcgcaaggccctctcgcaggccgcggcggccaccgccgagcgccaggggggcgagtcc
ctggagcgcaagggcctcacggactggacgatcggcacgctgacgcgggtcttcgagacg
cgccgggcgggtcagccggtgaaggcgtacccggccctcgtggacgacggcgacaccgtc
tcggtccgcctcttcgacacggaggcggaacaggcggaggcgatgtggaagggcacgcgc
aggctggtgctccgcaacatcccggtgaacccggcgaagttcgccagcgatcacctgacg
aacgcccagaagctggcgctctcggccaacccccacggcacgatccaggccctgttcgac
gactgcgcgatggcggcggcggacaagctgatcggcgacttcggggggccggcgtgggac
gaggagtcgtaccggaagctgtacgacaaggtccgcgcggagatcgtcgacacgacggtg
cgtacggtcggacaggtgcagcaggtgctggccgcctggcaggcctgtgagcggcgtctg
aagggcgtacgcagccccgcgctcctcgcgaacctgacggacgtgcgcaagcagctggac
gccctcgtgaagccgggcttcgtgacggcgacggggctgcgccggctgccggacctgatg
cgctacctggtcgccgccgaccgtcgcctccagcagatgccgacggccgtgcagcgggac
accacgcgcatggagaaggtccacgagatgcaggacgagtacgcctggctcctggagcag
atgccgcagggccgcccggtgccgaccgccgtcctggacatccgctggatgatcgaggag
ctccgggtcagctacttcgcccacgcgctgggcacggcgtaccccatctcggacaagcgg
atcgtgaaggcgatcgacgcggccgtaccgtaa
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