Streptomyces aquilus: EJC51_27865
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Entry
EJC51_27865 CDS
T07011
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
saqu
Streptomyces aquilus
Brite
KEGG Orthology (KO) [BR:
saqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saqu03016
]
EJC51_27865
Enzymes [BR:
saqu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
EJC51_27865
Transfer RNA biogenesis [BR:
saqu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
EJC51_27865
Prokaryotic type
tRNA splicing ligases
EJC51_27865
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AZP19548
UniProt:
A0A3S9I5A6
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All DBs
Position
6052323..6053516
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AA seq
397 aa
AA seq
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MSYVEMRGAKVPIRMWTDPASVEEGALQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSKIEQAIPVGRGMHDDPVDPG
RFHALPTAGWDDFWGRFDGVAEAVKFREERAGKQMGTLGSGNHFVEVCTDTTGSVWLMLH
SGSRNIGKELAEHHIGIAQKLPHNQGLIDRDLAVFVADTPQMAAYRNDLFWAQEYAKYNR
TIMMALLKDVIRKEFKKAKPTFEPEISAHHNYVAEERYDGMDLLVTRKGAIRAGSGEFGI
IPGSMGTGSYIVKGLGNPLSFNSASHGAGRRMSRNAAKRRFSTKDLEEQTRGVECRKDSG
VVDEIPGAYKPIEQVIDQQRDLVEVVAKLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtggaaatgcggggcgcgaaggttcccatccgtatgtggaccgaccccgcc
tcggtggaggagggcgcgctccagcagctgcgcaacgtcgccaccctgccctggatcaag
ggcctggcggtcatgcccgacgtccactacgggaagggcgcgacggtcgggtcggtcatc
gcgatgcggggagcggtgtgcccggccgcggtcggtgtcgacatcggctgcgggatgtcg
gcggtgaagacgtcgctgaccgcgaatgacctgccgggggatctgtcgcggctgcggtcg
aagatcgagcaggctattccggtggggcgggggatgcatgacgatcccgtcgatccgggg
cggttccatgcgctgcccaccgcggggtgggacgacttctgggggcggttcgacggggtt
gcggaggcggtgaagttccgggaggagcgggccgggaagcagatgggaacgcttggatcc
gggaaccactttgtcgaggtctgcacggatacgaccggttctgtctggctgatgctccac
tccggttcccggaacatcggcaaggaactggccgagcaccacatcggcatcgcccagaag
ctcccgcacaaccagggcctgatcgaccgcgacctcgccgtcttcgtggcggacaccccg
cagatggcggcgtaccgcaacgacctgttctgggcgcaggagtacgccaagtacaaccgc
acgatcatgatggcactcctcaaggacgtgatccgcaaggagttcaagaaggcgaagccg
accttcgagccggagatcagcgcgcaccacaactacgtggccgaggagcgctacgacggg
atggacctgctcgtgacccgcaagggcgcgatccgggccggttccggcgagttcgggatc
atcccggggtcgatgggcacgggttcgtacatcgtgaagggcctcggaaacccgctgtcc
ttcaactcggcgtcccacggcgccggtcggcgcatgagccgcaacgcggccaagcggcgc
ttctcgaccaaggacctggaggagcagacacggggcgtggagtgccgtaaggactccggt
gtcgtggacgagatcccgggcgcctacaagccgatcgagcaggtcatcgaccagcagcgg
gaccttgtcgaggtcgtggcgaagctgaagcaggtcgtctgcgtgaagggctga
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