Sorex araneus (European shrew): 101536844
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Entry
101536844 CDS
T07854
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101536844 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sara04990
]
101536844 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
sara04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
101536844 (LDB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
PDZ_2
DUF3854
Motif
Other DBs
NCBI-GeneID:
101536844
NCBI-ProteinID:
XP_004607470
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDMVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPVPISTAPPPMQSPLPVIPHQKDPTLDANGSLMAP
SPDPETGASPGNLGTPELRPNLSSSFSQTSGFSSHTEASEHGPPRGSPGATSSPEGASDT
HSPKGPLGPRQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLLGGADYQERFNPN
ALKDSALSTHKPIEVKGLGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQGSDFSGSL
PVKDLAVDSASPVYQAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDE
EALRRSRPQGAAAHPCLAASSAPATQTYSEAPAAPAPKPRVVTTASIRPSVYQPVPASTY
SPSPGANYSQTPYTPSPAPAYTPSPAPTYSPSPAPAYTPSPAPTYTPSPAPTYTPSPAPS
YNPTSTYGGAPSEPASRPPWVTDDSFSQKFAPGKGTTTISKQTLPRAGPGYTPTGAPLAR
GIVQRAERFPASSRTPLCGHCNNIIRGPFLVAMGRSWHPEEFNCAYCKTSLADRCFVEEQ
NNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDG
EPYCEKDYVNLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK
DRPLCKKHAHAINV
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacagcgtgaccctcaccggccccggtccctggggcttccgcctgcaggggggc
aaggacttcaatatgcccctcaccatctcgcggatcactccaggcagcaaggcagcccag
tcgcagcttagccagggtgacatggtggtggcgattgacggtgtcaacacggacaccatg
acccacttggaggcccagaacaagatcaaatctgccagctacaacctgagcctcaccctg
caaaagtccaagcgtcccgtccccatctcaacggctccaccccccatgcagtcccctctg
ccggtgatcccccaccagaaggaccctactctggacgcgaacggcagcctgatggcgccc
agccccgaccccgagacgggtgccagcccgggcaacctcggcaccccggagctcaggccg
aaccttagctcctccttctcccagacctccggcttctcttcacacacggaggcctctgaa
catgggcctcctcggggcagcccaggggccacaagcagcccagaaggggcctcggacaca
cacagcccgaaagggcccctgggccccaggcagccaaggcagtataacaaccccattggc
ctgtactcggcagagaccctgagggagatggctcagatgtatcagatgagcctccgaggg
aaggcctcgggtgtcggactcctaggaggcgcggactaccaggaacgcttcaaccccaac
gccctgaaggactcagccctgtcgacccacaagcccatcgaggtgaaagggctgggcggc
aaggccaccatcatccacgcacagtacaatacgcccatcagcatgtactcgcaggacgcc
atcatggacgccattgccggccaggcccaggcccagggcagtgacttcagtgggagcctt
cctgtgaaagacctggctgtggacagtgcctcgcccgtgtatcaggctgtgatcaagaac
cagaacaagcccgaagacgaggctgacgagtgggcccgccgttcctccaacctgcagtcc
cgctccttccgcatcctggcccagatgacgggcacagagttcatgcaagacccggacgag
gaagcattgcgaaggtcaaggccacagggtgctgctgcccatccatgtcttgctgcctct
agtgcacctgccactcagacctacagtgaagcccctgcagcgcctgcacccaaaccccgg
gttgtcacaactgccagtatccggccttctgtctaccagccagtgcctgcgtctacctac
agcccatccccaggggccaattacagtcaaactccctacaccccctctcctgcgcctgcc
tataccccctcacctgcccctacctactctccctccccagcaccagcctataccccctca
ccagcccccacctataccccctcgccagcccccacctataccccttcaccagcccccagc
tataaccccacatcgacctatggtggggccccttcggagcctgccagccgccccccatgg
gtgacagacgacagcttctctcagaagtttgcccctggcaagggtaccaccaccatcagc
aagcagaccttgcctcgagcgggtccgggctacaccccgacaggtgcccccctggccagg
ggcatcgttcagagggctgagcgcttcccagccagcagccggaccccactctgtggccat
tgcaacaacatcatccgggggcccttcctggtagccatgggccgttcctggcacccggag
gagttcaactgtgcctattgcaagacctcactggcagacaggtgctttgtggaggagcag
aacaacgtgtactgtgaacggtgctatgagcagttctttgccccgatctgtgccaagtgc
aacaccaaaatcatgggggaagtgatgcacgccttgagacagacctggcacaccacctgc
tttgtctgcgcggcctgcaagaagccctttgggaacagcctcttccacatggaagatggg
gaaccctactgcgagaaagactacgtcaatctgttcagcaccaagtgtcatggctgtgat
ttcccggtggaggccggtgacaagttcatcgaagctctggggcacacctggcatgatacc
tgcttcatttgcgcagtctgccacgtgaatctggaggggcagccgttctactccaagaag
gaccggccactctgcaagaagcacgcgcacgccatcaatgtgtag
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integrated database retrieval system
