Sorex araneus (European shrew): 101536900
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Entry
101536900 CDS
T07854
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM38-like
KO
K12014
tripartite motif-containing protein 38 [EC:
2.3.2.27
]
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sara04121
]
101536900
Enzymes [BR:
sara01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101536900
Ubiquitin system [BR:
sara04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101536900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4
U-box
zf-RING_2
Fib_alpha
zf-C3HC4_2
RDM
DUF3287
Motif
Other DBs
NCBI-GeneID:
101536900
NCBI-ProteinID:
XP_004621822
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MASSTSTKKMKEEATCCICLELMTEPVSIDCGHSYCRLCIVGIIENQCSMTAQRKFHCPQ
CRATFRRESLRPNKQLQNLIETIKETECEKLCEEHREQLHLFCEDDQQLICWRCERTRHK
GHVTALVEDVYQSYKEKFQKAVTILKDTKEQYKNLKLLTRKQITDWEEKTESRKQQIHAD
FKNLHMFLYEEEKSYIWKLEKVKEQTLENLLDREATLEKQIQELKDHIVELERKCQGSAQ
NLLQDVKDTLSRNSTINLVKPKDVLLKLDTVCNVSELYFDVTKMLRRYQTSVILDPETAH
PKLILSKDQRQVTCGSVQKKPDTPGRFSVLPCVLGCATFTAGRHYFEVDVGEGTQWDFGV
CLENVERNVDTIQGPQSGFWAIRLCKDKGYVALTSLLTPLRLKEHLEVMGVFLDYDAGFV
SFYNVNTGSHIYTFPKASFSHALRPYFQVYHYSPLFLPPPDE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaagcacaagtaccaagaagatgaaggaggaagccacctgctgcatctgcctg
gagctgatgactgagccggtgagcatcgactgcgggcacagctactgccgcctgtgcata
gtgggcatcattgagaaccagtgctctatgacagcgcagaggaagttccactgtccccag
tgccgagcgacatttagaagggagagcctccggcccaacaagcagctgcaaaacctcatt
gagaccatcaaggagacagagtgtgagaagctgtgtgaggaacacagagagcagctccac
ctcttctgtgaagacgaccaacagctcatctgctggcgctgtgagcggacacggcacaaa
ggacacgtcacagctcttgtggaagacgtctaccagagctacaaggaaaagtttcagaaa
gctgtgacaatactgaaggacacaaaagaacaatataagaatctgaagctgttaacaaga
aaacaaataactgactgggaggaaaagacagagagtaggaaacagcaaatccatgctgac
tttaaaaatctccacatgttcctatatgaagaggagaagtcttatatatggaagcttgaa
aaggtaaaagagcagactctagagaaccttctggacagagaggccacattggagaagcag
atccaggaactcaaggaccacattgtggaactggagaggaagtgtcagggctcagcccag
aatttgttgcaggatgtaaaagacaccttgagcaggaactcaactatcaacctggtaaaa
ccaaaggatgtgcttttgaagctggatactgtgtgcaacgtctctgagctttactttgat
gtgacaaaaatgttaaggcgttatcaaaccagtgtgattctggatccagagacagctcat
cctaaattaattctctcgaaggatcagaggcaagtgacttgtgggtctgttcagaagaag
cctgacactcctgggagatttagtgtcttgccctgtgtcctgggctgtgcgaccttcaca
gcaggaagacattactttgaagtggatgtaggagaaggaacccagtgggatttcggagtt
tgtctggagaacgtggagaggaacgttgacacgatacaggggccacagtctggattctgg
gccataagactatgtaaagacaaaggctatgtagccctcacctctctcttaactcccctt
cgtctgaaggagcaccttgaggttatgggggttttcctggactatgatgctggatttgta
tccttttacaatgtgaataccggctcacacatctacaccttcccaaaggcatctttctct
catgctctccggccctatttccaggtttatcattattctcctctgtttctgcctccccca
gatgagtaa
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