KEGG   Sorex araneus (European shrew): 101537038
Entry
101537038         CDS       T07854                                 
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
  KO
K24356  collagen type XXV alpha
Organism
sara  Sorex araneus (European shrew)
Pathway
sara04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:sara00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    101537038 (COL25A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:sara00536]
    101537038 (COL25A1)
Glycosaminoglycan binding proteins [BR:sara00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101537038 (COL25A1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 101537038
NCBI-ProteinID: XP_012789119
LinkDB
Position
Unknown
AA seq 625 aa
MLGKKPAGKGAAREPGAHTPGPAGPRCARALPPCAALAALLAAVAVLSCLYLGVKTNDLQ
ARIAVLEAAKGDPAFRVPPAAYLDELKAMVHEKVEQLLAQKSYEHMAKVRIAREAPSACN
CPAGPPGKRGKRGRRGESGPPGQPGPQGPPGMKGDKGEQGDQGPRGLPGFPTVAALHSNQ
ILTVKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGIMGPVGPPG
QKGSVGAPGLQGLNGQKGDAGLPGAEGQGGIPGLKGEPGERGEKGDAGESGPKGDPGAKG
DPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGE
RGALGPPGRGERGEPGVPGPKGERGDKGDSGALGPRGPPGQKGDQGATEIIDYNGNLQEA
LQGPPGPPGPQGLQGPKGEPGSPGTPGADGEQGLKGSKGDVGDPGVPGEKGGIGLPGLPG
ANGMKGEKGDSGLPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLNGVKGLKGD
PGQKGDRGPLGLPGASGLDGKPGSRGTDGPMGPHGPAGPKGERGEKGAAGEPGPRGPYGL
PGFPGPRGEKGDLGEKGEKVTPRRA
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgctggggaagaagcccgcggggaaaggggcggcccgcgagccgggcgcgcacaccccg
ggccccgccggcccgcgctgcgcccgcgcgctgcccccctgcgcggccctggccgccctc
ctggccgcggtggccgtgctgtcctgcttgtacctgggggtgaagaccaacgacctgcag
gcgaggatcgccgtcctcgaagcggccaaaggcgaccctgccttccgcgtgccgcccgcc
gcctacctggacgagctgaaggcgatggtgcacgagaaggtggagcagcttctggctcag
aaatcctatgaacatatggctaaagtcaggatcgccagagaagcgccttccgcatgcaac
tgcccggcaggacctcctgggaaacgaggcaaaaggggtcggagaggagagtctggtcct
cctggtcagcccggtccccagggccctcccggcatgaaaggtgacaagggagaacaaggt
gatcagggacctcggggtctgccaggcttccccacggtcgccgctctgcacagtaatcag
atcctcaccgtcaagggtgaccaaggacaggccggccccccaggaccccccggccctcca
ggccccaggggccctcccggggacacggggaaggacggcccccgaggaatgcctggtgtg
cccggcgagccagggaaaccaggagaacaaggcataatgggaccagtgggccctcctgga
caaaagggttctgttggagcacctggacttcaagggctgaatgggcaaaagggtgatgct
gggttgcccggagcagaaggacagggtggaattcctgggctaaaaggagaacctggagaa
agaggcgaaaagggagatgctggagagagcggccccaaaggagacccgggtgcaaagggc
gaccctggatcctctgctgcaggaattaagggtgaacccggagaatctggtcggccaggg
caaaagggtgaacccgggcttcctgggcttcctggacttccggggataaagggagaaccc
ggtttcattggtccccaaggagaaccaggcttaccaggcttgccaggaacaaagggtgag
cgtggggcgctggggcccccaggaagaggagagcgcggagagcctggcgtcccgggaccc
aagggtgaacgaggtgacaaaggtgactcaggagcgctgggaccaaggggtcctcccgga
cagaagggggaccaaggcgccacggagatcatcgactacaacggcaacctccaggaagcc
ttgcaggggccccctggaccacccggaccccaaggactacaaggaccaaagggagagccc
ggatctccaggaacccccggagctgatggagagcagggactcaaaggatccaaaggagat
gtgggggacccaggcgtgcccggggagaaaggcgggatcggactgcccgggttaccgggc
gccaacgggatgaagggagagaaaggagactcgggactgcctggtcctcaaggcccttct
atcatcggacccccaggacctccgggcccccatggccccccgggacccatgggaccccac
ggacttcccgggccaaagggtgaaccagggttaaatggtgttaaaggattgaagggtgac
ccgggtcaaaagggtgacagaggaccccttggtcttccaggagcatctggcttagacggg
aagccaggatcccggggtacagatggccctatgggaccccatggccctgcaggtcccaaa
ggagaacgaggtgaaaagggagcagcgggcgagccgggacccagaggcccctacggcctg
cctggtttcccgggtccacgaggcgagaagggcgatctaggagagaagggagagaaggtg
acaccccgccgtgcctaa

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