Sorex araneus (European shrew): 101537345
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Entry
101537345 CDS
T07854
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101537345 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sara03041
]
101537345 (DHX8)
Enzymes [BR:
sara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101537345 (DHX8)
Spliceosome [BR:
sara03041
]
Complex C
Other components
Step II factors
101537345 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
PRP38_assoc
nSTAND3
Flavi_DEAD
Sigma54_activ_2
PhoH
TsaE
ABC_tran
nSTAND_NTPase5
AAA_16
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
101537345
NCBI-ProteinID:
XP_004621027
LinkDB
All DBs
Position
Unknown
AA seq
1234 aa
AA seq
DB search
MAVAVALAGAAIGAELGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDSFKSSLVKNGAEFTDSLISNLLRLIQTMRPPAKPSASKDLVVKPKTEKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKPRDAEHRDKIKKRKRSRSR
SRSRERERERDRERERERDRDRDRDRERDRDRSRDHKRRHRSRSRTRDRNKGKSRYRSRS
RSQSPLKDRKDRDKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEG
LRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDL
NPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMI
AANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVK
NPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMR
GIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIV
IGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTI
RFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQ
KRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQ
IHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFD
PAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQ
RAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFM
DAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEML
TIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENF
IQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRT
LIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDP
TKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggccgtggcgctggcgggagccgccatcggagcagaactgggccccgcggaa
gaactcgccaaactcgagtacctgtctctggtgtcgaaggtctgcactgagctggacaat
cacttggggatcaacgacaaggacctggctgaatttgttatcagtcttgctgagaaaaac
accacctttgacagctttaagtcttctctcgtcaaaaatggtgcagagtttacggattct
ctcattagtaatttactgcgtctcatccagaccatgcggcctccagcgaagccttccgct
agcaaagatctcgttgttaaacccaaaactgagaaagagaagctgaaggaactcttccca
gtcttgtgccaaccagacaacccttctgttcggaccatgctggacgaagatgacgtgaaa
gtagctgtggatgttctgaaagaactggaggctttgatgcccagcgctgcgggccaggaa
aagccgagagatgctgagcaccgggacaagatcaaaaagaggaaacgcagccggagcagg
agccggagccgagagcgagagcgagagcgagacagggagcgggagcgggagcgggatagg
gaccgagaccgagacagagagcgcgaccgggaccgcagtcgtgaccacaagcggagacac
cgctcccgctcccggacccgggacaggaataaagggaagtctagataccgctccagaagc
agaagtcagagtcccctcaaggaccggaaggaccgagacaaatatggggagaggaatctg
gacagatggcgggataagcatgtggaccggcctccccctgaagaaccggccatcggggac
atctacaacggcaaagtcaccagcatcatgcagtttggctgctttgtgcagctggagggc
ctgaggaagcggtgggaaggcctggtgcacatctcggagctccggcgagagggccgcgtg
gccaacgtggctgacgtggtgagcaaaggacagagggtaaaggtcaaagtgctgtccttc
accgggaccaagaccagtctgagcatgaaggatgtggatcaagagaccggagaagatctc
aacccgaaccggcgacggaaccttgtcggggagaccaacgaggagacctccatgcggaac
ccagacagacccacgcacctgtctcttgtcagcgctcctgaggtggaggacgactcgttg
gagcggaagcgccttacccgcatctctgaccccgagaagtgggagatcaaacagatgatc
gcggccaatgtcctttccaaagaagagttcccagacttcgatgaagagactggcattctc
cctaaagtagatgacgaagaagatgaggacctcgagatcgagctggttgaggaagagccg
ccgttcctgcggggacacaccaagcaaagcatggacatgagccctataaaaattgtgaag
aacccagacggctccctctcccaagcagcgatgatgcagagtgccctggccaaggagagg
cgggagctcaagcaggcccagcgggaagcggagatggattctattcccatggggctcaac
aagcactgggttgatcctctgcctgatgcggaaggccggcagatagcggccaacatgagg
ggtattgggatgatgcccaacgacattccagagtggaagaagcacgcctttgggggcaac
aaggcttcgtacggaaaaaagacccagatgtccattctcgagcagagagagagcttgccc
atctacaagctgaaggagcagctggtccaggctgtgcatgacaatcagatcctgatagtt
atcggagagacgggatctgggaagacgacacagatcacccagtacctggcagaggcgggc
tacacttccaggggcaagattgggtgcacccagcccagaagagtggcagccatgtcggtg
gccaaacgagtgtcggaagagtttggttgttgcttaggccaagaggtgggctacaccatc
cggtttgaggactgcaccagccccgagacagtcatcaagtacatgacagacgggatgctg
ctccgagagtgcctgatcgaccccgacctcacgcagtacgccatcatcatgctggacgag
gcgcacgagcgcaccatccacacggatgtgctctttggtctgttgaaaaagacagttcag
aagcggcaggacatgaagttgattgtcacttcggccaccttggatgcagtgaagttctcc
cagtacttctacgaagctcccattttcaccatcccaggccgaacgtaccccgtggagatc
ctgtacaccaaggagcccgagacagattatctggacgccagcctgattactgtcatgcag
atccatttaacggaaccaccaggtgacatcctggtgtttctgactggtcaggaagagatt
gataccgcttgtgagatcctgtacgaaagaatgaaatcgctggggcctgatgtgccagag
ctgatcatcctgcccgtgtactcggccctgcccagtgagatgcagacccgcatcttcgac
ccagctcctcctggcagcagaaaggtggtgatcgccaccaacattgcagagacttcgctg
accattgatggcatctactatgtggtggacccaggtttcgtgaagcagaaagtttataat
tccaaaacaggaattgaccagctggttgtgactcccatttctcaggcgcaggccaagcag
cgcgctggcagagctgggagaaccggcccagggaagtgctaccggctgtacacggaacgc
gcctaccgggacgagatgctgaccaccaacgtgccggaaatccaaagaactaacttggcg
agcacggtgctgtccctcaaggccatgggcatcaatgacctgctgtcctttgacttcatg
gatgcgccgccaatggagacgctgatcaccgccatggagcagctgtacacgctgggggcc
ctggatgacgagggcctactcacccgcctgggccgcaggatggcagaattccccctggag
ccaatgctgtgcaaaatgctcatcatgtccgtgcatctgggctgcagtgaggagatgctg
accattgtctccatgctgtcggtgcagaacgtcttctacagacccaaggataaacaagcc
ctggcggatcagaagaaggccaagttccaccagacggaaggggaccacctcactctactg
gccgtgtacaactcctggaagaacaacaagttctccaatccctggtgctatgagaacttt
atccaggcccgttccctgcgccgggcccaggacattcgcaaacagatgttaggcataatg
gacagacacaagctggatgtggtctcctgtggcaagtccacagtccgcgtgcagaaagcc
atctgcagtggcttcttccgtaacgccgctaagaaagacccccaggagggttaccggaca
ctgatcgaccaacaggtggtctacatccacccttccagcgcgctcttcaacagacagccc
gagtgggtggtgtaccacgagctggtgctgacgacgaaggagtacatgcgtgaagtgacc
accattgacccccggtggctcgtggagtttgccccggccttcttcaaggtttccgacccg
acgaagctaagcaagcagaagaagcagcagcgtctggagcccctatataaccgctacgag
gagcccaacgcctggagaatctcccgggccttccggcggcgctga
DBGET
integrated database retrieval system
