Sorex araneus (European shrew): 101537420
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Entry
101537420 CDS
T07854
Symbol
PSMC4
Name
(RefSeq) 26S protease regulatory subunit 6B isoform X1
KO
K03063
26S proteasome regulatory subunit T3
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03050
Proteasome
sara05010
Alzheimer disease
sara05012
Parkinson disease
sara05014
Amyotrophic lateral sclerosis
sara05016
Huntington disease
sara05017
Spinocerebellar ataxia
sara05020
Prion disease
sara05022
Pathways of neurodegeneration - multiple diseases
sara05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
101537420 (PSMC4)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
101537420 (PSMC4)
09164 Neurodegenerative disease
05010 Alzheimer disease
101537420 (PSMC4)
05012 Parkinson disease
101537420 (PSMC4)
05014 Amyotrophic lateral sclerosis
101537420 (PSMC4)
05016 Huntington disease
101537420 (PSMC4)
05017 Spinocerebellar ataxia
101537420 (PSMC4)
05020 Prion disease
101537420 (PSMC4)
05022 Pathways of neurodegeneration - multiple diseases
101537420 (PSMC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sara03051
]
101537420 (PSMC4)
Proteasome [BR:
sara03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
101537420 (PSMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_lid_3
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
ATPase_2
NACHT
AAA_3
IstB_IS21
TsaE
AAA_7
AAA_18
AAA_33
Parvo_NS1
AAA_lid_PRS2_C
AAA_17
AAA_25
NB-ARC
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
101537420
NCBI-ProteinID:
XP_004620804
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MEEIGILVEKAQDEIPALSVSRPQTGLSFLAPEPEDLEDLYSRYKKLQQELEFLEVQEEY
IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID
RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREA
VELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL
GEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD
QNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL
EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaggagattggtatcctggtggagaaagctcaggatgagatcccagcactgtccgtg
tcacgaccccagaccggcctgtccttcctggcacctgagcctgaggacctggaggacctg
tacagccgctacaagaagctgcagcaagagctggagttcctggaggtgcaggaggagtat
atcaaggatgagcagaagaacctgaagaaggagttcctccatgcccaggaggaggtgaag
cgaatccaaagcatccccctggtcatcgggcagtttttggaggctgtggatcagaataca
gccatcgtgggctccaccacaggctccaactactacgtgcgcatcctgagcaccatcgac
cgggagctactaaagcccaacgcgtcggtggccctccacaagcacagcaacgcactggtg
gacgtgctgccccctgaggccgacagcagcatcatgatgctcacctcagatcagaagcca
gatgtgatgtatgcggacatcgggggcatggacatccagaagcaggaggtgcgggaggcc
gtggagcttccgcttacgcacttcgagctctataagcagatcggtatcgaccctccccga
ggcgtcctcatgtatggccctccgggctgtgggaagaccatgttggcaaaagccgtggcc
caccacacgacagctgcctttatcagggtcgtaggctccgagttcgtacagaagtacctg
ggtgagggcccccgcatggtccgtgatgtcttccgcctggccaaggagaacgcccctgcc
atcatcttcatcgatgagattgatgccattgccaccaagagatttgacgcccagacggga
gcggacagggaagttcagagaattctgctggagctgctgaatcaaatggacgggtttgac
cagaatgtgaatgtcaaggtgatcatggcgaccaacagagccgacaccctagatcctgcc
ctgctgcggcctggccgccttgaccggaagatcgaattcccactccccgaccgccgccag
aagaggctgatcttctccaccatcaccagcaaaatgaatctctcagaggaagtggacttg
gaagactatgtggcccggccagataagatttctggtgctgacatcaactccatctgtcag
gagagtgggatgctggcagttagggagaatcgctacattgttctggccaaggacttcgag
aaagcttataagacagtcatcaagaaggatgaacaggagcatgagttttacaagtga
DBGET
integrated database retrieval system
