Sorex araneus (European shrew): 101537444
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Entry
101537444 CDS
T07854
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101537444 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sara04121
]
101537444 (LMO7)
Ubiquitin system [BR:
sara04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101537444 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
101537444
NCBI-ProteinID:
XP_012787170
LinkDB
All DBs
Position
Unknown
AA seq
1398 aa
AA seq
DB search
MQDYNKDDMSYRRISAIEPKSALPFNRFLPNKSRQPSYVPAPLRKKKPDKNEDNRRSWAS
PAYAGADGAFPSHERRTWGTRVENWSAVQVTSHSSRYLEEEGRTRMRSIARDDLYVRKLS
PNLPTPGNTFDQFLPKCWIPEDVNWKRIKRETYKPWYKEFQGFSQFLLLQALQTYSDDVL
SSETHAKLDPTAGPRLITRRRNPSSALGYRRDDLELAALDPDLENDDFFVRKMGAFHANP
CVLRAFEDFRRFSGHEDPIERDIILQCREGELVLPDLERDDMIIRRIPAQKKEVPLSGAP
DRYQPVPFPEPWTLPPEIQAKFLCMLERTSPSKEKSNSCRVLVPSYRQKKDDMLTRKIQS
WKLGTAVPPISFTPGPCSEADLRKWEAIREASRLRHRKRLMVERLFQKIYGENGSKSLSD
VSAEDVQHLRQLHYDEMQKIKSQLKEQDQKWQDDLAKWKSRRKSYTSELQKKKEEREEIE
KLALETSERSSKTLKEMQQDRESRNQTSTMTSRRRVYSSDDVLSEEVFPPSLTTSEASDQ
SSRVEEKGTTSPEEAPKQDPTTFAKTEDSITVEIQRPSKSSMEEKQEQQPPPASLSSQHT
SSTQMESTRVSASFSRSYQRTDTARLTSVVTARPFGTHSRGITSLPRSYTLDDSWKYNGD
VDSSKRTQTSSGSALTRTPDPVPLTPSLSSVQETTVENVTRGPSPASSLASLSQDQPATS
KATLSSMSGLDSMSESGEGQGSPQREVSKSQDQFSDMRISINQTPGNALDFGFTVRWDFS
GIFVASVEPGSPAELFQLQVDDEIIAINNTKFSYKDKKEWEETMANAQETGNLVMDIRRY
GKSGSPETKWIDATSGIYSSDKSSSLSITTEFSESLRGSNIQSKEVNGICEESHSSETKA
SEPISLKNLKRRSQFFEQGSTDSVVPDLPVPTISAPSRWAWDQEEERKRQERWQKEQERL
LQEKYQREQEKLREEWQKAKQEAEQENSKYLNEELMVLNSSNISLMARESALAAWEASWG
EGSKSSDREGTRAGEEESSPQPEGSLSETLQEKLQEQLSLEKETKRKDEEQHREEQELRQ
RRFEEELEQRQXXAEEQKRQAERERETSIKIYQYRRPADSYDVPKREIESSGLLPSDRNK
SRSTTELDGYPTNKNGSNKFLDRAGNTGSLQRTYKKEQILSGAELERQQILQEMRKRTSL
HNDNSWIRQRSSSVNKEPICLPGIMRRGESLDNLDSPRSHSLRQSPWFNQSGGVQAASSV
QDFSRPLPHLVSTSNRAYMRTPSSSVPPPSVGSARTPSAPSPTPRSQSPSGTQPGSQLRS
RSVSGKRVCSYCNSILGKGAAMIIESLGLCYHLHCFKCVSCECDLGGSASGAEVRIRNNE
LYCNNCYLRFKTGRPTAM
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattacaataaggatgacatgtcctatcgaaggatttcggcaattgagcccaag
tcagccttacccttcaatcgcttcttgcccaacaaaagtagacagccatcctatgtgcca
gcgcccttgaggaagaaaaagccagacaaaaatgaagataaccggagaagctgggcaagc
ccagcctatgcgggagcagatggagcattcccaagtcacgagaggagaacttggggcacg
cgcgtggagaactggtccgcagtacaagtaacctcccactcctctcgctatttggaagag
gaaggaaggacacgcatgcgcagcatcgccagggatgatctttatgtgcgaaagctaagt
cccaacctgccgaccccagggaatacttttgatcagtttcttcccaaatgttggatcccc
gaagatgtgaactggaaaagaatcaaaagggaaacttataaaccatggtataaagaattt
cagggattcagtcagtttttattacttcaggccctccaaacatactcggatgacgtcttg
tcttctgaaacacatgccaaacttgatcccactgcgggccccagactcataacccgcaga
aggaatccctcttccgcactagggtacagaagagatgaccttgagctggcagccttggac
ccggacttagagaacgatgatttctttgtcagaaagatgggggctttccacgccaatccc
tgtgtcctgcgggcttttgaagacttcagaagattttctgggcatgaggatcctatagag
cgagatatcattttgcagtgtagagaaggggaacttgtccttcccgatttagaaagagat
gacatgatcatccgccggatccctgcgcagaagaaggaggtgcctctgtcgggggcacca
gatcgataccaaccagttcccttccctgaaccctggacacttcctccagaaattcaagca
aagtttctttgtatgctggagaggacgagcccgtccaaagaaaagagtaatagttgtcgc
gtgctggttccttcctaccggcagaagaaagacgacatgttgacgcgtaagatccagtct
tggaagctggggacagctgttcctcccatcagcttcacccctgggccctgcagtgaggcc
gacttgaggaaatgggaggccatccgggaggcgagcaggcttaggcacaggaagcggctg
atggttgagagactctttcaaaagatttatggtgaaaacgggagtaagtccttgagtgat
gtcagcgcagaggatgttcagcacctgcgtcagctgcattacgacgaaatgcagaaaata
aaatcacagttgaaagaacaagatcagaaatggcaagatgaccttgccaaatggaaaagt
cgtcgcaagagctacacctcagaactgcagaagaaaaaagaagagcgggaagaaatcgaa
aaactggctcttgagacgtcggaaaggagctctaagaccttaaaggaaatgcaacaggac
agggagtctcgaaatcaaacatctacaatgacatcgaggaggagagtttactcttctgat
gatgtgttaagtgaagaagtgtttcccccttcattgaccacatcagaagcaagtgatcag
agtagcagagtggaagagaaagggacaacatctcctgaggaagcccctaaacaagatcct
acaacttttgcaaaaacagaggacagtatcacagttgaaattcagcgtccttccaagagc
tccatggaagaaaagcaagaacaacagcccccgcccgcctctctgtcttctcagcacacc
tcgagcacacaaatggaatcgactcgagtttcagcttctttctccagaagttaccagaga
actgataccgccaggttaacatctgtggtcacagcgagaccttttggcacacattcaaga
ggaatcacatcactcccgagatcctacacgctggatgattcctggaagtataacggagat
gtagacagcagtaagaggactcagaccagttctggcagtgctttgactcggaccccggac
ccagtccctcttactcccagcttgtccagtgtgcaggagaccacagtagagaacgtcaca
cgaggcccctctcctgcctcttccttggcgtctctctcccaggaccagcctgccacttca
aaagccacattgtcttccatgtctggtctggattccatgtctgagtctggtgaagggcaa
ggctcaccccagagggaggtttcaaagtcacaggatcagttcagtgatatgagaatcagc
ataaaccagacgcctgggaacgctcttgactttggctttacagtaagatgggatttttcc
ggcatcttcgtagcatcagtggaaccaggtagtccagcagaactttttcagctacaggta
gatgatgagattattgctattaacaacaccaagttttcatataaggacaagaaagagtgg
gaggaaaccatggctaatgctcaagaaactggaaacctagtgatggatatcaggcgctat
ggaaagtctggttcacctgaaacaaagtggattgatgcaacttctggaatctacagctca
gacaaatcttcaagtctatcaattacgactgaattctcagaaagcctgcggggctctaat
attcagtctaaagaagtcaatggaatttgtgaggaaagccatagttctgaaactaaagca
tctgaacctatttctttgaaaaacctaaaaagacgatcacaattttttgaacaaggaagt
actgattctgtggttccggatctcccggttccaaccatcagtgccccgagtcgctgggcc
tgggatcaagaggaggagcgaaagcgacaggagagatggcagaaggagcaggagaggctg
ctgcaggagaaatatcagcgtgagcaggagaaactgagggaagagtggcaaaaggccaag
caagaggctgagcaagagaactccaagtacttgaatgaggaactgatggtcctgaactcg
agcaacatctctctgatggcacgggagtccgccctggccgcctgggaagccagctggggc
gaagggtccaaatcttcggacagggaaggaacccgagctggagaagaggagagcagcccc
cagcccgaggggagcctgagcgagaccctccaggagaagctgcaggaacagctcagtctg
gagaaggagacaaagcggaaggacgaagagcagcaccgggaggagcaggagctgaggcag
cgtcggtttgaggaggagctggagcagcgccagnnnnnngcagaggagcagaagcgccag
gcggagcgagaaagggaaacctccatcaaaatataccaatatcgaaggcctgctgattcc
tatgatgtaccaaagagagagatcgaatcttcaggtttgcttcctagtgacaggaataaa
tctagatccactacagagttggatggttatcctacaaataaaaatggaagcaataaattt
ttagaccgagctgggaacaccggctccttgcagagaacctacaagaaggagcagatcctc
tcaggagcagagttggagagacaacaaatccttcaggaaatgaggaagagaacctccctc
cacaacgacaacagctggatccgccagcgcagttccagtgtaaataaagagcctatttgt
ctgcctgggattatgagaagaggtgaatctctagataacctggattccccgagatcccac
tccttgagacagtccccttggttcaaccagtcagggggcgtccaagctgcttcctcagtt
caagacttcagccggccgctgcctcatctggtgtccacgtcgaaccgagcctacatgcgg
acaccctcctccagcgtgccccctccctctgtgggctcggcgaggacccccagcgctccg
tcccccaccccacgcagccagtccccttcggggacccagccaggctcccagctgcgcagc
aggtcagtgagtgggaagcgtgtgtgctcgtactgtaatagcattctgggcaaaggagcg
gccatgatcatcgagtccctggggctttgttatcatttacattgtttcaagtgcgtgtcc
tgtgagtgcgaccttggaggctctgcctcgggagccgaagtccgaatccgaaacaacgag
ctgtactgcaacaactgctatctcagattcaaaactggccggccaaccgccatgtga
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integrated database retrieval system
