Sorex araneus (European shrew): 101537484
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Entry
101537484 CDS
T07854
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sara03021
]
101537484 (CTR9)
Transcription machinery [BR:
sara03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
101537484 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
TPR_Slam
ARM_TT21_5th
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
101537484
NCBI-ProteinID:
XP_004613658
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPNDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGGGGRRSKKGGEFDEFVNDDTDDDMPISKKKKRRKGSGSEPEGEEEEGGERKKKKRR
RPTKGEEGSDDDETENGPKTKKRRPPRSEKKKAPKPERLPPSMKGKIKSKAIISSSDDSS
DEDKLKIADEGHPRNSNSNSDSDEGDHDHERRKRQDSSESDSDGNQNKSGSEAGSPRRVR
RARSDEDSDSDQPPRKRRPSGSEQSDNESVQSGRSRSGGSEIDSRPASPSAESDHDSERG
SDNEGSGRGSGNESEPEGSNNEASDRGSEHGSDDSD
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctctatcgagatccccctccgggacactgacgaggtcattgaacttgac
ttcgatcagttaccggagggagatgaagttatcagcattctgaaacaagaacacacacaa
ctgcacatatggattgctttggcgctggaatactacaagcaaggaaaaacagaagagttt
gtaaagttgttggaagcagcacgtatagatggcaatttagattatagagaccatgaaaaa
gatcagatgacttgcttggatacattagcagcctattatgtacaacaggctcggaaagaa
aagaataaggacaataaaaaggatcttattacacaggcgactctactgtatacaatggct
gataaaattatcatgtatgaccagaaccatcttctgggaagagcctgcttctgtctactt
gaaggtgacaaaatggaccaggctgatgcacagtttcattttgtacttaaccagtctcca
aataatatcccagctcttcttggtaaagcttgcatttctttcaacaagaaggattacaga
ggagctctcgcatactataagaaagcattacgtactaatccaggttgtccagctgaagtt
cgtttaggaatgggtcattgctttgtgaaacttaacaaactggagaaagctcgtctggca
ttcagcagagccctggaactcaattcgaaatgtgtgggagcattggttggattagctgtt
ctagaactcaacaataaagaggcagattccatcaaaaatggtgtccagcttctttccaga
gcctatactatcgaccccagcaacccaatggtattgaaccacttagcaaatcactttttc
ttcaaaaaggattatagtaaagtgcaacatttggccctccatgcattccataacacagag
gtggaggccatgcaagcggaaagttgctatcagctggccagatcattccacgttcaggaa
gattatgaccaagctttccagtactactaccaagccacccagtttgcctcatcgtctttt
gtgctgccattttttggtttgggacaaatgtatatttatcgaggtgacaaagaaaatgca
tcacagtgctttgagaaagttttaaaagcttatcctaataattatgaaactatgaaaatt
cttggctctctatatgctgcttcagaagatcaagaaaaacgagatatagccaagggacat
ttgaaaaaggtcacagaacaatatcctgatgatgttgaggcttggattgaattggcacag
atcttggaacagacggatatacagggtgccttgtcagcctatggaacagctacacggatc
ctacaggagaaagtacaggctgatgtccccccagagattctgaataatgtgggtgctctc
cattttagacttggaaatcttggcgaggcaaagaaatattttttggcatcattggatcgg
gcaaaggcagaagctgagcatgatgaacattattataatgccatttctgttacaacatca
tacaatttagccaggctctatgaagcgatgtgtgaattccatgaggcagaaaaactatat
aaaaacatcttacgagaacatcccaattatgttgactgctatctccgcctgggagccatg
gctagagataaaggaaacttttatgaagcttcagattggtttaaggaagctttgcagatt
aatcaggaccatccagatgcttggtcattgattggtaatcttcatttggctaaacaagaa
tggggtcctggtcaaaagaaatttgagagaattttaaaacaaccatctacacaaagtgac
acttactctatgctggcccttggcaatgtctggctccagactttgcatcagcccacccga
gatcgggaaaaggaaaagcgtcatcaagatcgtgctctggccatctacaaacaagtactc
agaaatgacgcaaagaatctgtatgctgctaatggtataggagctgttttggctcacaaa
ggatatttccgtgaagctcgtgatgtatttgcccaagtgagagaagcaacagcggacatc
agtgatgtgtggttgaacctagcacacatctatgtggagcaaaaacaatatattagtgcc
gtgcaaatgtatgaaaactgcctcagaaagttctataagcatcaaaacactgaagttgtg
ctctatttggcccgagccctcttcaaatgtggcaagctacaggaatgcaaacagactttg
ctaaaggctcgacacgtggcacccaatgatacagttcttatgtttaatgtggcattggtc
ctgcaaagattagctacctctgtcctgaaagatgaaaagagtaatctgaaggaagtactg
aatgctgtgaaagaactggaacttgcacatagatacttcagttacttgagtaaagtggga
gataaaatgaggttcgatttggcccttgctgctactgaagccaggcagtgctctgactta
ttgagccaggcccaataccacgtggccagggcacgcaaacaggatgaagaagaaagagag
cttcgagccaaacaagagcaggagaaagaactactaaggcagaaacttcttaaagagcag
gaagaaaaacgtctcagagaaaaggaagagcaaaagaaacttttggaacagcgggctcag
tatgtggagaaaaccaaaaatattcttatgtttactggagagactgaagcaacaaaagaa
aagaaaagaggtggtggtgggcggcgttccaagaagggaggagagtttgatgaatttgtc
aatgatgacactgatgatgacatgcctatatccaaaaagaagaagagaagaaagggtagt
ggtagtgaaccagaaggtgaagaagaggagggtggtgagagaaagaagaaaaagaggaga
agacctacaaaaggagaagaaggatctgatgatgatgaaacagaaaatggcccaaaaacg
aaaaagcgccgtcctccgagatcagagaagaaaaaggctcccaagccagaacgtctgcct
ccttcaatgaaaggaaaaataaaatccaaagccataatatcatcaagtgatgattcatcg
gatgaagataaactgaaaattgctgatgaaggacatcctcgaaacagcaacagcaacagc
gactcagacgagggtgaccatgaccatgagcggcggaagagacaagactcttcggagagt
gattctgatgggaaccagaacaagtctggtagtgaggcaggcagtccccggagggtccga
agagctcggtcagatgaggattcagacagtgaccagccacccagaaagaggaggccctcg
ggttctgaacagtctgataatgagtctgtgcagtcggggagaagccgctccggaggctct
gagatcgactctcgccccgcttctcccagtgccgagtcagatcacgattcagagagaggc
tctgataatgagggttccggccgaggctctggcaatgagtcagaaccagagggatccaac
aatgaggcctcggatcggggctcagaacatgggtcagatgatagtgactag
DBGET
integrated database retrieval system
