Sorex araneus (European shrew): 101537599
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Entry
101537599 CDS
T07854
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03013
Nucleocytoplasmic transport
sara03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101537599
03015 mRNA surveillance pathway
101537599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101537599
Enzymes [BR:
sara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101537599
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101537599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
PhaP_Bmeg
Motif
Other DBs
NCBI-GeneID:
101537599
NCBI-ProteinID:
XP_004600590
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAVKSMSDLQIKEEKVKPDSNGFIKPAAPAEKTDEEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYGMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCLCLSPTYELALQTGKV
IEQMGKFHPELKLAYAIRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSVRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPEPNIIKLKREE
ETLDTIKQYYVLCSNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMDILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcctgggcactggcggtggacgagcaggaggcggctgtcaagtcgatg
agcgatttgcagatcaaggaagagaaagtgaaaccagattccaatggtttcatcaaacct
gcagcacctgcagagaagacagatgaagaagagaaagaggacagagccgcgcagtcatta
ctcaacaagctgatccggagcaacctcgtggataacacgaaccaggtggaggtcctgcag
cgggaccccaactccccgctctactccgtcaagtccttcgaggagctgcgcctgaagcca
cagctactccagggtgtctacggcatgggctttaatcgaccctccaagatccaggagaac
gcgttacccatgatgctcgccgagcccccgcagaacctcatcgcgcagtctcagtcgggt
accgggaaaaccgctgccttcgtgctggccatgctcagccgagtggagccagcagagaga
tacccccagtgtctgtgcctctccccaacatatgagctggcgcttcagactgggaaagtc
attgagcagatgggcaagtttcatccggagctcaagctggcttacgccatccgaggcaac
aaactggagcggggtcagaagatcagcgagcagatcgtcatcggcacccctggcaccgtc
ctcgactggtgctccaagctcaagttcatcgaccccaagaagatcaaagtgtttgttctg
gatgaggccgacgtgatgatcgcgactcagggccaccaggaccagagcgtgcgcatccag
aggatgctgcccaggaactgccagatgctgctgttctctgccaccttcgaagactcggtg
tggaagtttgcccagaaggtggtccccgagcccaacatcatcaagctgaagcgcgaggag
gagacgctggacaccatcaagcagtactacgtgctgtgcagtaaccgtgacgagaagttc
caggccctgtgcaacctctacggggccatcaccatcgcgcaggccatgatcttctgccac
acacgcaaaactgcgagctggctggcagccgagctctccaaggaaggccaccaggtggcg
ctgctgagcggcgagatgatggtggagcagagggctgcggtgatcgagcgcttccgcgag
ggcaaagagaaggtgctggtcaccaccaacgtgtgcgcccgcggcatcgatgtggagcag
gtgtccgtggtcatcaactttgacctcccggtggacaaggacgggaacccagacaatgag
acctacctgcaccgcatcgggcgcacaggccgcttcggcaagaggggcctggcggtgaac
atggtggacagcaagcacagcatggacatcctcaacaggatccaggagcacttcaataag
aaaatcgagagattggacacggacgacctggacgagattgagaaaatagccaactga
DBGET
integrated database retrieval system
