Sorex araneus (European shrew): 101537646
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Entry
101537646 CDS
T07854
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101537646 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sara03400
]
101537646 (APEX1)
Enzymes [BR:
sara01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
101537646 (APEX1)
DNA repair and recombination proteins [BR:
sara03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
101537646 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
101537646
NCBI-ProteinID:
XP_004609573
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MPKRGKKGAVAEDGDEPKTEPEAKKSKAGAKKNEKEAAGEGAALYEDPPDKKTSPSGKSA
SVKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWA
APTDKEGYSGVGLLCRQCPIKVSYGIGEEEHDQEGRVIVAEFEAFVLVTAYVPNAGRGLV
RLEYRQRWDEAFRKFLKGLASHKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQEREGF
GELLQAVPLADSFRHLYPDTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKI
RSKAMGSDHCPITLYLAL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgaggaaaaaagggagcggtggcagaagatggagacgaacccaagactgag
ccagaggctaagaaaagtaaggcgggagcaaagaaaaatgaaaaagaggcagcaggagaa
ggagcagccctttatgaggacccgccagacaagaaaacctcacccagtggcaaatcagcc
tcggtcaagatctgctcctggaatgtggatgggcttcgggcctggattaagaagaagggt
ttagattgggtcaaggaagaagcaccagatatcctgtgcctccaagagaccaaatgttca
gagaacaaactaccagctgaacttcaagagctgcctggactatcacatcagtactgggca
gcccctacagacaaggaagggtacagtggcgtgggcctactctgtcgccagtgcccaatc
aaagtctcttatggcattggtgaggaagaacatgatcaggagggccgagtgatcgtggct
gaatttgaggcgtttgtgctggtaactgcctatgtaccgaatgcaggccgtggtctggtg
cgcctggagtaccgccagcgctgggatgaagcttttcgcaaattcctcaaagggttggct
tcccacaagccccttgtgctatgtggagacctcaatgtggctcatgaagaaattgacctt
cgcaaccccaaaggaaacaaaaagaatgctggcttcacaccccaagaacgtgaaggcttt
ggagagctcctgcaggcggtgcctctggctgacagcttccgtcacctctaccctgacacg
gcctatgcctacaccttttggacttacatgatgaatgctcggtccaaaaacgttggttgg
cgccttgactacttcctgttgtctcattctctgttacctgccttgtgtgacagcaagatt
cgttccaaggctatgggcagtgaccactgtcctattaccctctacctagcactgtga
DBGET
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