Sorex araneus (European shrew): 101537915
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Entry
101537915 CDS
T07854
Symbol
BDP1
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor TFIIIB component B'' homolog
KO
K15198
transcription factor TFIIIB component B''
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sara03021
]
101537915 (BDP1)
Transcription machinery [BR:
sara03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
101537915 (BDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
101537915
NCBI-ProteinID:
XP_012788175
LinkDB
All DBs
Position
Unknown
AA seq
2601 aa
AA seq
DB search
MFRRARLSVKPNVRPSVGARGSGAAAPQRGPEPARPPEPAAPAAPPPAEPAEEAPADFGG
AEPQEQAPRSSDEKTDGENDVVEESSKSSSIVSQRRKRVSSTSSVVKPNVSVPSEPQPLS
AVNSEAPTPSPVPTAEKQPCSDRYRIYKAQKLREMLKEELRKEKKQWKNKYATSESQRPP
DRSKMTMRDFIYYLPDNNPMTSSLEQEKRTEKSLTTVQSKEQESKNPPDTEDNEDIEEEA
DDGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFRKNY
YSKPWSNKETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQE
KRPFDFDFFAHLLQKVLAEEEKRKQKSVKSQPLREKKSSKPQKNVKAKKVTSEGVSDDPD
ESVGTKVSDTEGLQKDAQTIEEQSSASSEQDLEQGTSESDLNQNKRRKKNRDESGKQAVK
NQLENTTAQPVPSEEEKQDVSLRILSHXHVLFLSSQQDATSVRGETLESCAVDSPPPDID
VGALCALSLAEGSSTEKRTVDVESKTLEADQVENVKPKVRGRLQRPKPNLSRAVGKKPVL
TQSKTLAESKSLHPETSVEKSNMEKDEVNTADISVMENTTEVKDADAEAVSNSSEKICPQ
EDDEPKVFRPARLLRGRLQRPKPNISKAAERKETPASQDKNGANVEKSEIQSCADRNTPE
QVDDKSCKNFECENVVSQPEKNDSSQNIQLDDHAAPNECLSIQEDSTSNIFKQVPILKTR
FQKPKPNIGRGTRKREMFSKEEVAEEILASEKMTAALREIARLEISPREEVPVEVDNTQE
INSCLKESGRRDISPKEKIAETVDTTEEMETDLKETGMEISSSQTVAEVTEVIEEEELGF
KETEVEISPSESVPEMTEINEEKESRLKETGVEISPSKTISEMTDVIEEKESDLKEIVEE
ITPCQRIAEMIEITEEEKSDLKETGKEITPCQRIAEMIEITEEKESDLKETGEEITPCQR
IRIAEMIEITEEKESGLKETGEETTPCQRIAEMIEITEEKESDLKETGEEITPYQRIEMI
GITEEKELDLKETGEMITPYQTIEMVEITEENESDLEETGDEIIPYQRIAEMIEFSEERE
TDMKEIEEITPFQIAEMIEITEERETDMKEIEEITPCQRIAEEIEITEERETNLDETKRK
EIPPNEGVSNEVNTIGEVETDLRGTEKEISLMERALVGISAIGEREVFMKETGKGDMSLM
EKIPGKGTGTAERKADLKETQEDIFFMKSRSEETGAAEEMVADLKPVRPVDVSLRENKTE
ETGTLRQTERDLTQDSCDRSASPSLNASNISSELLPMVQTSVEVKTSSEMEMSSSVHSLQ
ILDYSIIEDQGMHSTDIQEQFSDVNISTSLPEEQKPAEVKPAPFVRSRFKRPKPNLARAA
LKRETLAAKTPVPGKKLETARTEGVVLAQSTVLSEQQDVAPLTTSGEKDESCPREGADGA
LPGMHPERDLVPTSSGGSKEEAESAPAWEEDVAVSLGTQSTNSLQQEIKENTTQSAVPVR
GRLQRPRPNLRKAGQRQVAAGVEARGGTLEDRRTTLQKEEAEKKLLDAANSQLGIEIEVV
SSKISECRMNDILDEQKSHEHKAHVPSPAPLVRRQFQKVKPNLGRAHGKREERCPGKGRA
GQSQAREPEENWLQQGNSDTQLLEKDKFELQTSHEISARKDGVVGSTEPGLTRKGAQSEV
RPSASIGERTVGDNPVSSIIKEQHLNKPPSCPQLLKESSYSKTALDRRTASSSISEREID
QSERRMHRKIKSNAARGRGSKRVRSKAPKKEPRTSKAMLVTLRASQEEEDDDVDDLDLDY
EEESYHLAPEEVNKAPVFVPIGLRSPEPVTAQIEETMEELEITMDVPDVGCITVVEQELL
NVEVNPQEVKQDVSENMLTVEITTSEHTQNEAGPSDGNAEAAVALLTVGDVLLQSQISVE
QGQVGICVLPDVQSRDKNHIPFSPDHVNHSIVHECQDLSSPVTTTSSSSLKENKIVLDGQ
STTEKIELMEEAKEETLSHRNTASEVTNNLKMRSRFAKPKVNLTKILGTNSVGAHPNLPG
TKGEEEEIHRETEKSASDTAELEENLEAVTAAESWEQSRLADVIGVQGSLEHGNLTERNE
DQEVEHQQAQILSVAPVVSSDPSCSPLTLGSSEALSESPTDAPPAQGSEGCSVLTLHVPE
CISTSIPEIQEENVIGSQDLTVNVIAADVQQDNEDEHTFILTLVEIPANEVEEFADTTTQ
LMPNPLLPAPILLKSVNNEETGDMSMNFPVTPISQDAMCLSDSGGESEKPLANLDVSRKR
FHCSLDESDSVPPAKKSSFASVDNCEKYSSEVCSKELVNVFEETGASHKEQNNVPTSGSI
PTTPKSQKRQLEPSTLQSIGSRSLDKITDRQLEKTPPLLPQDKMVVSDKEERTCSASKSE
QMHNRPSSSKTSLSRPGRRPLGFLSLICSKSSLESDEPTQFHKKKRPKPLIPVARQNLKR
SNPPSESQKTNPESSDVLPSSSGASTASENLNSPAAASQVSCDHPLLEEKCKSGPNQAPG
EEPTTVSEYFFGDIFIEVDET
NT seq
7806 nt
NT seq
+upstream
nt +downstream
nt
atgttccgccgggcacgcctgagcgtgaagccgaatgtcaggcctagtgtgggcgctaga
ggctccggcgccgccgccccgcagcgtggacccgagcctgctcggcccccggagcccgcg
gcgcccgcggccccgccgccagccgagcccgcggaggaggcgccggcggatttcggggga
gcggagccccaggagcaggctcccaggagcagtgatgaaaagaccgatggtgagaatgat
gttgttgaagaatccagtaaatcttcctctattgtttcacagagaagaaagcgagtatca
agtacttctagtgtggttaagcctaatgtcagtgttccttcagaacctcagcccttgtct
gcagttaactcagaagctcctacaccaagcccggttccaacagcagagaaacagccatgc
tcagatagatatcggatatataaagcccagaaactgagagaaatgttaaaagaagaactg
agaaaggagaagaaacaatggaaaaacaagtacgccacaagtgaaagtcagaggcctcca
gatcgttcaaaaatgaccatgagagacttcatatattatctgccagataataatccaatg
acttcttcactggagcaagaaaagagaacggaaaagtccttgacaacagtccagagcaaa
gagcaagaaagtaagaaccctcctgatactgaagataatgaagacatagaagaagaggcg
gatgatgggccgttgcttgttcctcgagtaaaagtggcagaagatggttctattattttg
gatgaagaaagtttaactgtagaagtgttaaggacaaaaggcccctgtgttgttgaagaa
aatgaccccatatttgagcgtggctctacaactacgtattccagctttaggaaaaactat
tattccaaaccgtggtcaaataaagaaacagatatgttctttttagccatcagcatggtg
ggaactgacttttctatgatcggacagctttttcctcacagagcaaggatagaaattaag
aataaatttaagcgtgaagagaaaaccaatggatggaggattgataaagcatttcaggaa
aagcgtccttttgacttcgatttttttgctcatttgcttcagaaagttcttgctgaagaa
gagaaaagaaaacaaaagtctgtaaaaagtcagcctttaagggagaagaaatcttctaaa
ccacagaaaaatgtgaaagcgaagaaagttaccagtgaaggagtcagtgatgatcctgat
gagtctgtaggcactaaagtttcagacacagaaggacttcagaaagatgctcagacaatt
gaagaacagtcttcagcatcatcggagcaggatttggaacagggtacatcagagtcagac
ctaaatcaaaacaaaaggagaaagaagaatcgggatgaaagtggcaaacaggcagtcaaa
aatcaattagaaaataccactgctcagccagtgccttctgaagaagagaaacaggatgtg
tcactgagaattctttcccactgacatgtccttttcctcagtagtcagcaggatgccacg
tcagtcagaggtgagaccttggaatcatgtgctgtagattcccctccaccagacatcgat
gtgggagccttgtgtgcgctcagccttgctgagggtagttctacagaaaaaagaactgtg
gatgtagaaagtaaaactctggaagctgatcaagtagaaaatgttaaacccaaagtgaga
ggacgactccagagacctaaacccaatttatcaagggcagttgggaagaaaccagttctt
acacaaagcaaaacacttgcagagagcaagagtttgcatccagaaacttccgttgaaaag
agtaacatggagaaggatgaagtgaatacagctgacatttctgtaatggagaatacaaca
gaggtgaaggatgcagatgctgaggctgtatctaattcgagtgaaaaaatttgtccgcag
gaagatgacgaaccaaaggttttcagacctgcacgactattaagaggacgattgcaaagg
ccgaagccaaatataagtaaagctgctgaaagaaaagagactccagcgtcacaggataaa
aatggggctaatgtagaaaagagtgaaattcaatcctgtgctgatagaaatactcccgag
caagtagatgacaagtcatgtaaaaattttgaatgtgaaaatgtcgtgtcacaacctgag
aaaaatgattcttctcagaatatacaattagatgaccatgcggctcctaatgaatgtctg
agtattcaagaggatagtacatcaaacatattcaaacaagttccaattctaaagactcga
tttcagaaaccaaagccaaatataggaagaggaactagaaaaagagaaatgttctctaag
gaggaggtagcagaggagattcttgcctctgagaaaatgacagcagctttgagagaaatt
gcaagactggaaatctcaccaagggaggaggtacccgtggaggttgataatactcaagaa
ataaattcttgtttaaaagaatctggaagaagagatatatctcccaaggagaagattgca
gagacagttgacaccactgaagaaatggaaacagatttgaaagaaactggaatggagatt
tcatcaagtcagacagtagcagaggtgactgaagtcatcgaggaagaagagttaggtttc
aaagaaactgaagtagagatttcaccaagtgaatcagtacctgagatgactgaaatcaat
gaggaaaaagagtcacgtttgaaagaaactggggtagagatttcaccaagcaagacaata
tcagagatgactgatgtcattgaagaaaaagagtcagatttgaaagaaattgtagaagag
attacaccatgtcagaggatagcagagatgatagaaatcactgaggaagaaaagtcagat
ttgaaagaaactggaaaagagattacaccatgtcagaggatagcagagatgatagaaatc
actgaggaaaaagaatcagatttgaaagaaactggagaagagattacaccatgtcagagg
ataaggattgcagagatgatagaaatcactgaggaaaaagagtcaggtttgaaagaaact
ggagaagagactacaccatgtcagaggattgcagaaatgatagaaatcactgaggaaaaa
gagtcagatttgaaagaaactggagaagaaattacaccatatcaaaggatagagatgatt
ggaatcaccgaggagaaagagctagatttgaaagaaactggagaaatgattacaccatat
cagactatagaaatggttgaaatcactgaggaaaatgagtcagatttggaagaaactgga
gatgagattataccatatcagaggatagcagagatgatagaattctctgaggaaagagag
acagatatgaaagaaattgaagagatcacaccatttcagatagcagagatgatagaaatc
actgaggaaagagagacagatatgaaagaaattgaagagattacaccatgtcagaggata
gcagaggagattgaaatcactgaggaaagggagacaaatttagacgaaactaaaagaaaa
gaaatacctccaaatgaaggagtctcaaatgaggtcaacacaattggtgaagtagagaca
gatttgaggggaactgaaaaagaaatttccctaatggaaagggcactggtggggatcagt
gccataggggaaagggaggtttttatgaaagaaactggaaaaggagatatgtccttgatg
gagaaaataccaggaaaggggactggcactgcggaaaggaaggcagatttgaaagaaact
caagaggacattttcttcatgaaaagcagatcagaagaaactggtgctgctgaggaaatg
gtggcagatttaaaaccagtgagacctgtagatgtttctttaagggaaaataaaaccgag
gagactggtaccttaagacaaactgagagagacctgacacaggacagttgtgaccgcagc
gccagtccttctctgaatgccagtaacattagcagtgaacttcttcccatggtacaaact
tctgtagaagtaaaaacaagttctgaaatggaaatgtcaagttcagtgcactctttgcaa
attttggactacagtataatagaagatcaagggatgcactctacagatattcaagagcag
ttttcagatgttaatataagcacatcgcttcctgaagagcagaagccagctgaagttaag
ccggcaccttttgtgaggagccgatttaaaagaccaaaaccaaacttggcaagagcagct
ttgaaaagagagaccctggcagcaaaaacacctgttcctgggaagaaattggaaactgct
agaacagagggtgtagtgctggcacagagcacggtcctgtctgagcagcaggatgtggct
cctctcacgacatcaggagagaaagacgagtcatgtcccagggagggggccgatggggca
ctgcctggcatgcaccctgagcgggatcttgtgccgacaagttctggtggatctaaagag
gaggctgagtctgcgccagcctgggaagaggatgtcgctgtttccctgggaactcagagt
acaaacagtttgcaacaagagataaaggaaaacacaactcaaagtgctgttccagtgagg
ggccggcttcagagacccagaccaaacctcagaaaggctgggcagaggcaggtagcagca
ggagttgaagccagaggtgggacacttgaggatcgaagaacaacattacaaaaagaggaa
gcagaaaagaaattgctagatgcggcaaattctcagcttggaattgaaattgaagttgta
tcctccaaaatttcagaatgcagaatgaatgatattttagatgaacagaaaagtcacgag
cataaagcacatgttcctagtccagcaccgttggtaagaaggcagttccaaaaggttaag
ccaaatctgggacgagcacatggcaagagagaggagcgctgtccaggaaaaggcagggct
ggtcagagccaggcgagggagccagaagagaattggctgcagcaaggaaattctgacacc
cagctgcttgaaaaagacaagtttgagcttcagacttctcacgagatttcagcaagaaag
gatggtgtagtaggttccacagagcctggtttgaccaggaaaggtgctcagtcagaagtt
aggccatcagcgagtattggagaaagaactgtaggggataatcctgtgtcttccattatt
aaagagcagcatctcaataaaccacccagttgtccacagctcttaaaagagtcaagttat
tctaaaactgctttggatcgaagaacagcaagctcttctatctctgagcgcgaaatagat
cagagtgaaaggagaatgcacagaaagatcaaatcaaatgctgctagagggcgtggatca
aaacgggtgcggagtaaggcccctaagaaggaacctcgaacttcaaaggccatgctggtg
acgcttcgtgcttcccaggaagaagaggatgatgatgttgatgatttggaccttgactat
gaagaagaaagctatcatcttgctcctgaagaagtgaacaaagcgccggtattcgtgccc
attggtctcagatctcctgaacccgttactgctcagatcgaagaaacaatggaagagctt
gaaataaccatggatgtcccagatgttggatgtataacagttgttgaacaggagctgcta
aacgtagaagtgaatcctcaggaagtgaaacaagatgtcagtgagaatatgctaacagtt
gaaataaccacaagtgaacacacccaaaatgaagcagggcccagtgacgggaacgctgaa
gctgccgtagccttgctcacagtgggagacgtgctgctgcagtcccagatcagcgtggag
cagggccaagtaggaatatgtgtacttcctgatgttcagtcaagggataaaaaccatatt
ccttttagcccagatcatgtaaatcacagcattgtgcacgaatgccaggacctttcttca
cctgtgactactacatcttcctcatcattgaaagaaaacaagattgtactggatgggcaa
agtactacagaaaaaattgaattaatggaggaagcaaaggaagaaactctttcacacagg
aatacagcttctgaagtgaccaataatttgaaaatgagaagtagatttgccaaacctaag
gtaaatcttacgaagattttagggaccaatagtgttggtgctcatcctaatttgcctgga
accaaaggggaagaagaggaaattcacagagaaactgagaaaagtgcttctgatacggca
gaattagaagagaaccttgaagcagtcacagcagcagaaagctgggagcaaagcagattg
gcagatgtgatcggtgtccaggggtccctggagcatgggaacctgactgagaggaatgaa
gatcaggaggtggagcaccagcaggctcagatactttcagttgctccagttgtttcctcg
gatccaagctgttccccgctcacacttggctcgagtgaggctctcagtgagagtcccaca
gatgcgccaccggcccagggctcagagggctgcagtgtgctcacgctccatgtgccagag
tgtatatcaactagtattccggaaatccaagaagagaatgtaatcggttctcaagatcta
acagtgaatgtcattgctgctgatgtacaacaagataatgaagatgaacatacattcatc
ttaactctggtggaaatcccagccaatgaagtggaagagtttgctgacacaaccacccag
ttgatgcccaaccctttacttccagcacccatcttactcaagtcagtgaataacgaagaa
acgggtgacatgagtatgaatttcccagtaactcccatcagtcaggatgccatgtgttta
tctgactctggaggagaatctgaaaagcctctggccaacttggatgtatcaaggaagaga
tttcattgtagccttgatgagagtgacagtgttcctcctgccaagaaaagttcatttgct
tcagtggataattgtgagaaatattcctctgaggtgtgttcaaaggaattggtgaatgtt
tttgaagaaacaggggcatcacataaggaacaaaacaatgtccctacttcaggaagtata
cctaccactccaaaatctcagaagaggcaacttgaaccttccactcttcaaagcataggc
tccaggtcgcttgataaaataacagacaggcaactagaaaagactccacctctcttacct
caggacaaaatggtcgtttctgataaggaagaaaggacttgctctgcttctaagtctgaa
caaatgcataacagaccttcatcttcaaaaacctcgctctccagacctggcagaagaccc
ttgggatttttgtctttaatatgttcaaagagtagtttggagtctgatgaacctactcag
tttcataaaaagaagcgccccaagcctcttatccctgtagcaagacagaatttgaaaaga
tcgaacccacccagtgaaagccagaaaacaaacccggagtcctctgatgtgcttccatct
tcaagtggtgccagtactgcatctgagaacctcaacagtccggctgcagcctctcaggtt
tcttgtgaccatcccttactggaagaaaaatgtaaaagtggcccaaaccaggcacctggg
gaggagccaacaacagtgtctgagtatttctttggtgatatctttattgaagtggatgaa
acataa
DBGET
integrated database retrieval system
