Sorex araneus (European shrew): 101538208
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Entry
101538208 CDS
T07854
Symbol
WIPI2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04136
Autophagy - other
sara04140
Autophagy - animal
sara05010
Alzheimer disease
sara05014
Amyotrophic lateral sclerosis
sara05016
Huntington disease
sara05017
Spinocerebellar ataxia
sara05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101538208 (WIPI2)
04136 Autophagy - other
101538208 (WIPI2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101538208 (WIPI2)
05014 Amyotrophic lateral sclerosis
101538208 (WIPI2)
05016 Huntington disease
101538208 (WIPI2)
05017 Spinocerebellar ataxia
101538208 (WIPI2)
05022 Pathways of neurodegeneration - multiple diseases
101538208 (WIPI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101538208 (WIPI2)
03029 Mitochondrial biogenesis [BR:
sara03029
]
101538208 (WIPI2)
Membrane trafficking [BR:
sara04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
101538208 (WIPI2)
Mitochondrial biogenesis [BR:
sara03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101538208 (WIPI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
DUF7165
Beta-prop_TEP1_2nd
Beta-prop_RSE1_2nd
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_IFT140_1st
RMC1_N
VID27
Motif
Other DBs
NCBI-GeneID:
101538208
NCBI-ProteinID:
XP_004617300
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MGHRNAIRPLVEKYRCIGRRMRTPHRAASGAHGEASRVRMCDRNPARARVANFNQDNTSL
AVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKLKVCHFK
KGTEICNYSYSNTILAVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRETPPNPAGLCALS
ISNDNCYLAYPGSATIGEVQVFDTINLRAANMIPAHDSPLAALAFDASGSKLATASEKGT
VIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGVFLSASSNTETVHIFKLETVKEKPQ
EEPSTWTGYFGKVLMASTSYLPAQVTEMFTQGRAFATVRLPFCGHKNICSLATIQKIPRL
LVGASDGYLYMYNLDPQEGGECTLMKQHKLDGSMETTHEILDSATQDCPLVAQPYSPAAA
KAYTEELGAVGGACLEEEAGTLRLEEDSEHPPMILRTD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgggacataggaatgccatacggcccctggtcgaaaaatatcgatgtattggaaggcgc
atgcgcactccgcaccgcgccgccagcggcgcccacggcgaggcctcgcgcgtgcgcatg
tgcgaccggaacccggcccgggcccgggtcgccaacttcaaccaggacaacacgtcccta
gctgttggtagtaagtccggttataaatttttctccctttcttctgtggataagctggaa
cagatctatgaatgcactgacactgaggatgtgtgcatcgtggaaaggctgttctccagc
agcctcgtggccatcgtcagcctcaaggcccccaggaagctcaaagtttgccacttcaag
aagggcacggagatatgcaactacagttattccaacaccatcctagctgtgaagctcaac
cgccagaggctgattgtgtgcctggaagagtctctgtacatccacaatatccgggacatg
aaggtgctgcacaccatcagggagacgcccccgaaccctgcgggcctatgtgcactttcc
atcagcaacgacaactgctatctggcctacccgggcagcgccaccatcggggaggtgcag
gtcttcgacactatcaacctgagagccgccaacatgattccagcacacgatagtccactg
gcagcgctggcctttgacgcgagcgggtccaagctcgccaccgcctctgagaaggggact
gtgatccgggtgttttccattccagagggacagaaactctttgaattccggagaggagtc
aagaggtgcgtgagcatctgctcactggccttcagcatggacggtgtgttcctctcagca
tccagtaacacggagactgtgcacatcttcaagcttgagactgtgaaggagaagcctcag
gaggagcccagcacctggaccggctacttcgggaaggtgctcatggcctccaccagctac
ctgcccgcccaggtcaccgagatgttcacccagggccgcgcctttgctaccgtccgcctg
cctttctgcggccacaagaacatctgctcactggccacaatccagaagattccccggtta
ctggtgggagcctctgacggctacttgtacatgtacaacctggacccccaggagggtggt
gaatgcaccctgatgaagcagcacaagttggacggcagcatggagacgacccacgagatc
ctggactcagccactcaggactgccccttggtggcccagccctacagccccgctgcggcc
aaagcctacacagaggagctgggtgccgtgggtggggcctgcctggaggaggaggcgggc
accctgcgcctggaggaggacagtgagcacccacccatgattctccgcaccgactga
DBGET
integrated database retrieval system
