Sorex araneus (European shrew): 101538404
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Entry
101538404 CDS
T07854
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
101538404 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sara03036
]
101538404 (DICER1)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101538404 (DICER1)
microRNA pathway
RISC loading complex
101538404 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
PAZ
ResIII
Helicase_C
DEAD
Dicer_dimer
Cas3-like_C_2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
101538404
NCBI-ProteinID:
XP_012790688
LinkDB
All DBs
Position
Unknown
AA seq
1732 aa
AA seq
DB search
MAALQLLTPASSPMGPFFGLPWQQEAIPDNIYTPRKYQVELLEAALDHNTIVCLNTGSGK
TFIAVLLMKELSYQIRGDCQDNGKRTVFLVNSANQVTQQASAVRTHSDLKVGEYASLEGS
ASCTKEKWSQEFTKHQVLVMTCYVALNALKNGYFSLSDINLLVFDECHLAILDHPYREIM
KLCENYPLCPRILGLTASILNGKCDPEELGEKIQKLEKILKSNAETATDLVVLDRCTSQP
CEMVVDCGPFADRSGLYERLLMELEDALNFINDCNISVHSKERDSTLISKQILSDCREVL
VVLGPWCADKVAGMMVRELQKYIKQEQEGLHRKFLLFADTFLRKVHALCEQHFSPASLDL
RFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEVDDDDEEIEEKEKP
ETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPR
NKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK
GRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKGPPMDCVRRAERAVALICCEKLHKIG
ELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPQPGQ
PCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTARCFGILTAKPIPQIPHFPVYTRSGEVT
ISIELKKSGFTLSLQKLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNH
SSTLDIDFQFMEDIEKSEARIGIPNTKYSKESPFVFKLEDYQDAVIIPRYRNFDQPHRFY
VADVYTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLN
QKGKALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLT
AEELRAQTASEAGVGVRSLPVDFRYPNLDFGWKRSIDSKSFISATSSSSASESDPHCKHS
TTVAPDSAAHPGANPPSSPGSCRAAPPAATVNGLAHHGDLANGSCDAANGDFCQGDELSH
GRPEIPEQPPTSYSIQNFYNSANQPQPQPSDECTLLSHKYLDGNANTSTSDGRPVAAAPR
PGTPEAAAAVSAPRDRTELQQSPCPGHSPRTLGPNPGLILQALTLSNASDGFNLERLEML
GDSFLKHAITTFLFCTYPNAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPV
NWLPPGYVVNQDKSHSDKWGKDDLTKDCMLANGRLEDAFGEDEEEDDEEEEELTWRAPKE
DPDYEDDILEYDQEHIKFIDNMLMGSGAFVKKISLSAFAAPDAAGEWKVPPKPPLGAAPF
PSDFEDFDYSSWDAMCYLDPSKAGEEDDFVVGFWNPSEESCGAEAGKQCISYDLHTEQCI
ADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLEVLPALPRAPAAGGGGGGGGAPRPAL
WKDLEYGCLQIPPRCMFDHPDADRTLLQLISGFGNFERKINYRFKNKAYLLQAFTHASYH
YNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYD
YHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSEVVMMVMVLLMVILMMVLMMVMMLMV
MVLMMVMLMVMVLLMVMLMVMVLMMVMLLMVLMMEVLLECTLLEWTHRSVTV
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctgcagctcctgacccccgcttcctcaccaatgggtcctttctttggattg
ccatggcaacaagaagctattcctgataacatttatacgccaagaaaatatcaggtcgaa
ctgcttgaagcagctctggaccataacaccatagtctgcttaaacactggctcagggaag
acgttcatcgcagtgctactcatgaaggagctgtcctatcagatccgcggggactgccag
gacaatgggaaaaggacggtgttcttggtcaactctgcaaaccaggtcacgcagcaggcc
tccgcggtccggacccactcggatctcaaggtcggggaatacgcaagcctcgaaggaagt
gcttcttgtacaaaggagaaatggagccaagagttcactaagcaccaggttcttgttatg
acttgttatgtcgccttgaatgctttgaaaaatggttacttttcactctcagacattaat
cttttggtgtttgatgagtgccatcttgcaatcttagaccatccctaccgagaaattatg
aagctctgcgaaaactacccactctgtcctcggattctgggactcactgcttccatttta
aatgggaaatgtgatccagaggaactgggagaaaaaattcagaaactggagaaaatcctt
aagagtaatgccgaaactgccacggacttggtggtcttggacagatgcacttctcagccc
tgtgagatggtggtggattgtggaccatttgctgaccggagtgggctgtacgagagactg
ctgatggagttagaagatgcacttaattttatcaatgactgtaacatatctgtacattca
aaagaaagagattctactttaatttctaaacagatactgtcggactgccgggaggtcttg
gtcgtcctggggccatggtgtgcggacaaggtggccggcatgatggttcgggagctgcag
aagtacatcaagcaggagcaggaggggctgcacaggaagttcctgctcttcgcagacacc
ttcctgcggaaggtccacgcgctgtgcgagcagcacttctcgcccgcctcgctcgacctg
aggttcgtgactcctaaggtgatcaagctgctcgagatcttgcgcaaatacaaaccgtac
gagcgccagcagtttgagagcgtggaatggtacaacaacaggaaccaggacaattacgtg
tcttggagtgattccgaggttgatgacgatgatgaggaaattgaagaaaaagagaagcca
gagacaaatttcccttctccgtttaccaacattttgtgcgggattatttttgtggagagg
agatacacggcagtcgtcttaaacagattgataaaggaagccggcaagcaggacccggag
ctggcttacatcagcagcaacttcataactggacacggcatcgggaagaaccagcctcga
aacaaacagatggaggccgaattccgcaagcaggaagaggtacttagaaaatttcgggca
catgagaccaacctgcttattgcaacaagtattgtggaagagggtgttgatattccaaaa
tgcaacttggtggttcgttttgatttgcccacagagtatcggtcctatgttcagtccaag
gggagagccagggcccccatctctaattacataatgttagcagataccgacaaaatcaaa
agttttgaagaagacctgaaaacgtacaaagctattgaaaagggcccgcccatggattgc
gtccgacgggccgagagagccgtggcactcatctgctgtgaaaagctgcacaaaatcggc
gagctggatgaccacttgatgcccgttgggaaagagacggtcaagtatgaagaagagctt
gacttacacgacgaagaggagaccagtgttcccggaaggccgggctccaccaagcgaaga
cagtgctacccgaaagcaatcccggagtgcctgcgggagagctacccgcagcccggccag
ccctgctacctgtacgtgatagggatggtcctcaccacgccactccccgacgagctcaac
ttccgacggcggaagctctaccctcccgaagacaccgcccgctgcttcggaatcctgacc
gccaaacccatacctcagatcccgcacttccccgtgtacacgcgctccggggaggtcacc
atatccatcgagctgaagaagtccgggttcacgctgtcactgcagaagctggagctgatc
acacggcttcaccagtatatcttctcgcacattcttcggctcgaaaagcctgcactagaa
tttaagcccaccgacgccgactccgcgtactgtgtcctacctcttaacgttgttaatcac
tccagcactttggacatcgactttcagttcatggaagacattgagaagtctgaagctcgc
ataggcattcccaacacaaagtactcaaaggaatcaccgttcgttttcaaattagaagac
taccaggatgcagttatcattccaagatatcgcaattttgatcagccccatcgattttat
gttgcggatgtatacactgatcttaccccactgagtaaatttccttcccccgagtatgaa
acgtttgcagaatattataaaaccaagtacaaccttgacctgaccaatctcaaccagccc
ctgctggacgttgaccacacgtcgtcgagactcaatcttttgacacctcgccatctgaac
cagaagggaaaagcgcttcctctgagcagtgccgagaagaggaaggccaagtgggagagt
ctgcagaacaagcagatcctggtcccggagctctgtgccatccacccgatcccagcgtca
ctgtggagaaaggctgtttgtctccccagcatcctctatcgccttcactgccttctgacc
gcggaggagctgagagcccagacggccagcgaggccggcgtgggggtccgctccctcccc
gtggacttcaggtaccccaacctggacttcgggtggaagaggtccatcgacagcaagtct
ttcatctcggccacgagctcctcttccgcctcggagagcgaccctcactgtaagcacagc
acaactgtagcccctgacagtgctgcccacccaggtgctaacccaccctcctcccccggg
agctgcagggccgcgccccccgcggccaccgtcaacggcctggcccaccatggagaccta
gccaacggcagttgcgacgcggccaacggagacttttgccaaggagacgagctgagtcac
ggcaggccggaaatacctgaacaaccacctacctcatattccattcagaatttctacaac
tccgcgaaccagccccagccccagcccagcgatgaatgtactctgctgagtcacaaatac
cttgacggaaacgctaacacatctacctcagatggacgtcccgtggcggctgcgccgcgg
cctggtaccccggaggcggcggcggcggtgagcgcaccccgggaccggacggagctccag
cagagcccctgccccgggcactccccgaggactctgggcccgaaccccgggctcatcctg
caggcactcaccctgtccaacgccagcgacggcttcaacctggagcggctggagatgctg
ggggactccttcctgaagcacgccatcaccaccttcctgttctgcacctaccccaatgcc
cacgagggccgcctgtcctacatgcgcagcaagaaggtcagcaactgtaacctgtaccgg
ctggggaagaagaaggggctgcccagccgcatggtggtgtccatattcgacccccccgtg
aactggcttcctcccggctacgtggtcaatcaggacaaaagccactcggataagtggggc
aaggacgacctgacaaaagactgcatgttggccaacggcaggctggaggacgccttcggg
gaggatgaggaggaggacgacgaggaggaggaggagctcacgtggagggcgcccaaggag
gaccccgattacgaggacgacattctggagtacgaccaggagcacatcaagttcatcgac
aacatgctgatggggtcaggcgccttcgtcaagaagatctcgctctcggccttcgccgcc
cccgacgccgcgggcgagtggaaggtgcccccgaagccgccgctgggggccgcgcccttc
ccgtccgacttcgaggactttgactacagctcgtgggacgccatgtgctacctggacccc
agcaaggctggcgaggaggacgacttcgtggtgggcttctggaacccgtcggaggagagc
tgcggcgccgaggcgggcaagcagtgcatctcgtacgacctgcacacggagcagtgcatc
gccgacaagagcatcgccgactgcgtggaggccctgctgggctgctacctgaccagttgc
ggcgagcgcgctgcgcagctcttcctctgctcgctggggctggaggtgctgcccgccctg
ccccgggcccccgcggccggtggcggcggcggtggtggcggcgccccccgcccggcgctc
tggaaggacctggagtacggctgcctgcagatccccccgcggtgcatgttcgaccacccc
gacgccgacaggacgctcctgcagctcatctcgggcttcggcaacttcgagaggaagatc
aactaccggttcaagaacaaggcgtacctgctgcaggccttcacccacgcctcctaccac
tacaacaccatcacggattgctaccagcgcctcgagttcctgggagatgcgattctggac
tacctcataaccaagcacctttacgaggacccccggcagcactccccgggggtgctcacg
gacctccgctcggcgctcgtcaacaacaccatcttcgcgtcgctggccgtcaagtacgac
taccacaagtacttcaaagccgtgtccccggagctcttccacgtcatcgatgacttcgtg
cagttccagctggagaagaacgagatgcagggcatggactcggaggtggtgatgatggtg
atggtgctgctgatggtgatactgatgatggtgctgatgatggtgatgatgctgatggtg
atggtgctgatgatggtgatgctgatggtgatggtgctgctgatggtgatgctgatggtg
atggtgctgatgatggtgatgctgctgatggtgctgatgatggaagttctcctggagtgc
accctgctggaatggacacatcgttctgtgactgtgtga
DBGET
integrated database retrieval system
