Sorex araneus (European shrew): 101538550
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Entry
101538550 CDS
T07854
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101538550 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sara04147
]
101538550 (COPA)
Membrane trafficking [BR:
sara04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
101538550 (COPA)
Exosome [BR:
sara04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101538550 (COPA)
Exosomal proteins of bladder cancer cells
101538550 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
101538550
NCBI-ProteinID:
XP_004613818
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNVLHYVKDRFLRQLDFSSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGSLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEHSHPLPLTAIVICNRKLEALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNIEIALEAAKALDDKSCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILRNCGQKSLAYLTAATHGLDEEA
EGLKETFDPEKETVPDIDPEARLLQPPAPIMPLDTNWPLLTVSKGLFESSIASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEAGEGFGDDALGKGQEEGGGWDVEEDLELPPE
LDLPPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQ
FGPYKQLFLQTFARGRTTYQALPCLPSMYSYPQRNWKDAGLKGGVPAVGLKLNDLIQRLQ
LCYQFTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLVAICREYIVGLSMEIERK
KLPRDSPEQQKRICEMAAYFTHSNLQPVHMVLVLRTALNLFFKLKNFKTAATFARRLLEL
GPKPEVAQQTRKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YSPEFKGQVCRVTTVTEIGKDVIGLRISPLQFR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaagttcgagaccaagagcgcgagggtgaaagggctcagctttcaccccaaa
cgcccttggatcctcaccagtctgcacaatggggtcatccagctgtgggactatcggatg
tgcaccctcatcgacaagtttgacgagcacgatggcccggtgcgaggcatcgacttccat
aagcagcagccactcttcgtctctggcggtgacgactacaagatcaaggtgtggaactac
aagctccgacgctgcctcttcacgctgctcgggcacctggactacatccgcaccaccttc
ttccaccatgagtacccctggatcctgagcgcctccgacgaccagaccatccgggtgtgg
aactggcagtctaggacttgcgtctgcgtgctgaccggacacaaccactatgtgatgtgt
gcgcagttccacccctcggaggacctggtggtgtcggccagcctggaccaaaccgtgcgc
gtctgggacatctctggcctgcggaagaagaacctgtccccgggggcggtggagtccgat
gtcagaggcatcaccggcgtggatctcttcggcaccaccgacgccgtggtcaagcacgtg
ctggagggccacgaccgcggcgtgaactgggccgccttccaccccaccatgccgcttatc
gtgtccggggctgacgaccgccaggtgaagatctggcgcatgaacgagtccaaagcgtgg
gaggtggacacctgccgcggccactacaacaacgtgtcctgtgccgtcttccacccgcgc
caggagctcattctcagcaactcggaggacaagagcatccgggtctgggacatgtccaag
aggacgggggtccagaccttccgcagggaccacgaccgcttctgggttctggccgcgcac
cccaacctcaacctcttcgcggcaggccacgacggcggcatgatcgtgttcaagctagag
cgggagcggcccgcctacgccgtgcacgggaatgtgctacactacgtcaaggaccgcttc
ctgcggcagctggacttcagcagctccaaggacgtggctgtcatgcagctgcgcagcggg
tccaagttccccgtgttcaacatgtcctacaaccccgcagagaacgccgtgctgctgtgc
acgagagccagcaatttggagaacagcacctacgacctgtacaccatccccaaggacgcc
gactcgcagaaccctgacgcccccgaagggaagcgctcctcgggcctgacagccgtgtgg
gtcgcccgcaaccgctttgccgtcctggaccgcatgcactcgctcctgatcaagaacctg
aagaacgagatcactaagaaggtgcaggtgcccaactgcgacgagatcttctacgcgggc
acgggcagcctactgctgcgggacgcggagtccatcaccctcttcgacgtgcagcagaag
cggaccctggcgtcggtgaagatttccaaggtgaagtatgtgatctggtcggctgacatg
tcgcacgtggccctcctggccaagcatgagcactcacaccctctgcctcttacagccatt
gtgatctgtaaccgcaagctggaggctctgtgtaacattcacgagaacatccgcgtcaag
agtggggcctgggacgagagcggggtctttatctataccaccagcaaccacatcaagtat
gccgtcaccacgggggattatgggatcatccggaccctggacctgcccatctatgtcacg
cgggtgaagggcaacaacgtctactgcctggaccgggagtgccgcccgcgggtgctcacc
atcgaccccacagagttcaagttcaagttggcgttgatcaacaggaagtatgatgaggtg
ctacacatggttcggaatgccaagctggtgggccagtccatcatcgcgtacctgcagaag
aagggctaccccgaggtggcgctgcactttgtcaaggacgagaaaacgcgcttcagcctg
gccctggagtgcgggaacattgagatcgccctggaagcggccaaagccctggacgacaag
agctgctgggagaagctgggcgaggtggcgctgctgcagggcaaccatcagatcgtggag
atgtgctaccagcgcaccaagaacttcgacaagctctccttcctctacctcatcaccggc
aacctggagaagctgcgcaagatgatgaagatcgctgagatccgcaaggacatgagtggc
cactaccagaacgccctgtacctgggtgacgtgtcggagcgtgtgcgcattctccggaac
tgcgggcagaagtccttggcctatctcactgctgccacccatggcctggacgaggaggcc
gagggcctgaaggagactttcgaccccgagaaggagacggtccccgatattgaccccgag
gcccggctgctgcagcccccggcacccatcatgccgctggacaccaactggcccctgctg
accgtgtccaaggggctcttcgaaagctccatcgccagcaagggtaaaggtggtgcgctg
gccgccgatatcgacattgacaccgtgggcaccgagggctggggagaggacgccgagctg
cagctggacgaagatggatttgtggaggctggcgagggctttggggacgacgctctgggc
aaggggcaagaggaaggtggcggctgggacgtggaggaggacctggagctcccccccgag
ctggacctgcccccaggggcagcgggcggggctgaggatgggttcttcgtgccccccacc
aaggggaccagccccacacagatctggtgcaataactctcagcttccggtcgaccacatc
ctggcgggctccttcgagacggccatgcggctcctccacgaccaggtgggggtgacccag
ttcgggccctacaagcagctgttcctgcagaccttcgcccgtggccgtaccacctaccag
gctctgccctgcctgccctccatgtacagctacccccagcgcaactggaaggatgcgggg
ctgaagggcggcgtgcccgccgtgggcctgaagctgaacgacctcatccagcgcctgcag
ctctgctaccagttcaccacggtcggcaagttcgaggaggccgtggagaagttccgctcc
atcctgctcagcgtcccgctgctggtggtcgacaacaagcaggagatcgccgaggcgcag
caactcgtcgccatctgccgcgagtacatcgtgggcctgtccatggagatcgagcgtaag
aagctgcccagagactcgcccgagcagcagaagcgcatctgcgagatggccgcctacttc
acgcactccaacctgcagcccgtgcacatggtgctggtgctgcgcacggccctcaacctc
ttcttcaagctcaagaacttcaagacggccgccacctttgcacgccggctgctggagctc
gggcccaagcccgaggtggctcagcagacccggaagatcctgtcggcatgcgagaagaac
cccacagacgcctgccagctcaactacgacatgcacaaccctttcgacatctgcgccgcg
tcctaccggcccatctaccgggggaagcccgtggagaagtgcccgctgagcggcgcctgc
tactccccagagttcaagggccaggtgtgcagggtcaccacagtgactgagatcggcaag
gacgtcatcggcctgcgcatcagcccgctgcagttccgctga
DBGET
integrated database retrieval system
