Sorex araneus (European shrew): 101538661
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Entry
101538661 CDS
T07854
Symbol
PMS2
Name
(RefSeq) LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03430
Mismatch repair
sara03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101538661 (PMS2)
03460 Fanconi anemia pathway
101538661 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sara03400
]
101538661 (PMS2)
DNA repair and recombination proteins [BR:
sara03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
101538661 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
ArsA_ATPase
Motif
Other DBs
NCBI-GeneID:
101538661
NCBI-ProteinID:
XP_004622885
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All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MWGRRRKLXRLNDLTISTCHESAKIGARLVFDHNGKIVQKSPCPRPRGTTASVQQLFYTL
PVRHKEFQRNIKKEYARMVQVLQAYCIISTGIRVSCTNQVGQGKRQPVVCTSGSSSIKEN
IGSVFGQKQLQSLIPFVQLPPSDPVCEEYGLSCSDTLTNLFCISGFISVCAHGVGRSSTD
RQFFFINRRPCDPAKISRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQ
EEKLLLAVLKTSLIGMFESDANKLHVNQQPLLDIEGHSIKISSTAVEVPLPGMQSHPASP
GARGEERKAVSISRLREAFALHHTTGTIAPRPKTTDPKQVSPRQKKSIPLCGSGDLLSSQ
KLVVGTGSPVPQEGLRGLDQRPHDQMEKDSGCGSTSTSSEGGLSTTEKGTFSSSEQAASS
LEDRFSQDNVAAHEKPPEASCCISASESPLDQEDDGDEAEALPPPTKRFKTEGAGSPGQL
PEPQLVDIAVDISKKIVPLHFSMRSLSQRVKYLRHQQQQGEGGQGYRKFRARICPGENQA
AEEELRKEISKAMFAEMEVIGQFNLGFIITKLNADLFIVDQHATDEKYNFEMLQQHTVLQ
GQRLIAPQTLGLTAVNEAVLIENLDIFRKNGFDFVIDEAAPVTERAKLISLPTSKNWTFG
PQDIDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDH
PWNCPHGRPTMRHIANLDVISQN
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtggggtagaagaagaaaactttgaaggcttaatgacttgacaatctctacctgccat
gagtctgcgaagattggggcacggttggtgtttgatcacaatgggaaaatcgttcagaaa
agcccctgccctcgacccagagggacaacagccagcgtgcaacagttattttatacgcta
cctgtgcggcataaggagtttcaaaggaatattaaaaaagagtatgccagaatggtccag
gtcttacaggcatactgtatcatttcaacaggcatccgtgtaagttgcaccaatcaggtt
ggacaaggaaaaagacagcctgtggtttgcacatcaggcagctccagcataaaagagaac
atcggatctgtgtttgggcagaaacagctgcagagcctcattccttttgtccagctgccc
cctagtgatcccgtctgtgaagagtacgggctgagctgctctgacactctaaccaaccta
ttttgcatctcaggcttcatttctgtgtgtgctcatggggttggaaggagttcaacggac
agacagtttttctttatcaaccggaggccatgtgacccagccaagatttcccggcttgtg
aatgaggtctatcacatgtataatcgacatcagtatccatttgttgttctgaacatttct
gttgactctgagtgtgttgatatcaatgtgactccggataaaaggcagattttgctgcag
gaagagaagttattgctggcagttttaaagacgtctttgataggaatgtttgagagtgat
gccaataagcttcatgtaaatcagcagccattgttggatattgaaggtcactcgatcaaa
atttcttcaacagcagtggaagtgccacttccaggaatgcagtcccatcccgcctctcca
ggcgctcgtggagaggagagaaaggctgtgagcatctccagactgagggaggcctttgct
ctccatcacacaaccgggaccatagctccacgcccaaagaccactgaccctaagcaggtt
tcacccagacagaaaaaaagcatcccattgtgtggcagtggggatctcctcagctcccag
aagcttgtcgtgggcacaggctcccctgtccctcaggaggggctgaggggtttagatcag
cgtccccacgaccaaatggagaaggactcagggtgtggcagcacatcaaccagctcagag
ggaggcctcagcaccaccgaaaagggcactttctctagcagtgagcaggcagccagctcc
cttgaagacaggttttcacaagataatgtggcagctcatgagaagccccctgaggccagt
tgttgcatttctgcctccgagagtcccctggaccaagaggacgatggagacgaagcggag
gctctgcctccacccactaagcgcttcaagacagaaggggccggcagccctggccagctg
cccgagccgcagctggtggacatcgcggttgacatcagtaagaaaatagtgcccctccac
ttctccatgcgttctttgtcccagcgagtaaagtatctacggcaccaacaacagcaagga
gaaggtgggcagggttacagaaagttcagggccaggatttgccccggggaaaaccaggct
gcagaagaggaacttaggaaggagatcagtaaagcaatgtttgcagagatggaagtcata
ggccagtttaacctgggatttatcatcaccaaactcaacgctgacctcttcatagtggac
cagcatgcgacggacgagaagtacaactttgagatgctccagcagcacactgtcctccag
ggccagaggctcatagcacctcagactcttggcctcactgctgtcaatgaagcagttctg
atagagaatctggacatctttaggaagaacggctttgattttgttattgatgaagctgca
ccagtcaccgaaagggccaagctgatttccttgcccaccagtaagaactggacgtttgga
ccccaggacatagatgagttgatcttcatgctaagtgacagccctggggtcatgtgccgg
ccttcccgagttaggcagatgttcgcctccagagcctgccggaagtctgtgatgatcgga
actgctctcaacacaagtgagatgaagaaacttatcacccacatgggtgagatggaccat
ccctggaactgtccccatggaaggccaactatgaggcacattgccaatctggacgtcatt
tctcagaactga
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