Sorex araneus (European shrew): 101539005
Help
Entry
101539005 CDS
T07854
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara00260
Glycine, serine and threonine metabolism
sara00630
Glyoxylate and dicarboxylate metabolism
sara00670
One carbon pool by folate
sara01100
Metabolic pathways
sara01200
Carbon metabolism
sara01230
Biosynthesis of amino acids
sara01240
Biosynthesis of cofactors
sara01523
Antifolate resistance
sara04981
Folate transport and metabolism
Module
sara_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
101539005 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
101539005 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
101539005 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
101539005 (SHMT1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
101539005 (SHMT1)
Enzymes [BR:
sara01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
101539005 (SHMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
101539005
NCBI-ProteinID:
XP_004612891
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MATPVNGAPRDAELWASHERMLAQPLRDNDAEVYNIIKKESHRQRVGLELIASENFASRA
VLEALGSCLNNKYSEGYPGQRYYGGTEFVDELEILCQKRALQVYCLDPQCWGVNVQPYSG
SPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDNGY
IDYDQLEQNARLFHPKLIIAGTSCYSRNLDYARLRKIADENGAYLMADMAHISGLVAAGV
VPSPFEHCHVVSTTTHKTLRGCRAGMVFYRRGVRSVDPKTGKEILYNLESLINSAVFPGL
QGGPHNHAIAGIAVALKQALTPEFTLYQRQVVANCRALAATLMGLGYQVVTGGSDNHLIL
VDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKEFQE
VAHFIHRGIELTLQIQNDMGAKATLKEFKEKLEGDEKHQRAVKTLREEVERFASGFPLPG
VPDF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccagtcaatggagcgcccagagatgctgagctgtgggcctcacacgagcga
atgctggcccagcccctgagagacaatgatgctgaggtttacaacataatcaagaaggag
agtcaccggcagagggtggggttggagctcatcgcctcagagaatttcgccagccgagca
gtcttggaggctctaggctcttgcttaaataacaaatactctgaagggtacccaggccag
aggtactatggtggcaccgagttcgtcgatgagctggagatcctttgtcagaagcgagcg
ttgcaggtctattgtctggacccccagtgctggggggtcaacgtccagccctactctggc
tcccctgcaaacttcgctgtgtacacggcgctggtggaacctcacgggcgcatcatgggc
ttggacttgcccgacgggggtcatctcacccacggcttcatgacggacaagaagaaaatc
tctgccacatccatcttcttcgaatccatgccctataaggtgaacccagataacggctac
atcgactacgaccagctggagcagaatgcccgcctcttccacccgaagctgatcatcgca
ggtactagctgctattcccggaacctggactacgcccggctgcggaagattgcagatgag
aatggggcgtatctcatggccgacatggcccacatcagcgggctggtagcggcgggcgtg
gtgccctcacccttcgaacactgccatgtggtgtccaccaccacccacaaaactctgaga
ggctgccgcgctggcatggtcttctacaggagaggtgtgcgcagtgtggatcctaagacc
ggcaaagagattctatacaacctcgagtcactcatcaactctgctgtgttcccaggcctg
caaggagggccccacaaccacgccattgctgggatcgctgtggccctgaagcaggccctg
acgccagagttcacactgtatcagcgccaggtggtggccaactgcagggctctggctgcc
accctgatggggctgggctaccaggtggtgacaggtggttctgacaaccatttgatcctt
gtggatctccgttctaaaggcacagacggtggcagggctgaaaaggtgctagaagcctgt
tcaattgcttgcaacaagaacacctgccccggtgacaaaagtgcactgcggcctagtgga
ctgcggctaggaacgccagcactgacatcccgagggctcctagagaaagagttccaggaa
gtggcacactttattcacagagggatagaactgactctgcagattcagaacgacatgggt
gcaaaggccaccctgaaggagttcaaggagaaacttgaaggcgatgagaagcaccagagg
gctgtcaagactctgagggaagaggtggagcgctttgcctctggctttcctctgcctggc
gtgcctgacttctaa
DBGET
integrated database retrieval system
