Sorex araneus (European shrew): 101539310
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Entry
101539310 CDS
T07854
Symbol
SLC6A12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04082
Neuroactive ligand signaling
sara04721
Synaptic vesicle cycle
sara04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
101539310 (SLC6A12)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
101539310 (SLC6A12)
04721 Synaptic vesicle cycle
101539310 (SLC6A12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sara02000
]
101539310 (SLC6A12)
Transporters [BR:
sara02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101539310 (SLC6A12)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
101539310
NCBI-ProteinID:
XP_004603941
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All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MAMDGKVAVHEDGLPVVSWVPEEGEKLDREGQQQVKDRGQWTNKMEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFFIPYFIFFITCGIPLFFLEVALGQYTSQGSVTAWRKICPLFQGI
GLASVVIESYLNIYYIIILAWALFYLFSSFTSQLPWTTCTNYWNTEHCMDFLNKSGASSA
ASAENFTSPVIEFWERRVLSITSGIHDLGTLRWELALCLLLAWILCYFCIWKGVKTTGKV
VYFTATFPYLMLIILLIRGVTLPGAYEGIIYYLKPDLLRLKDPQVWMDAGTQIFFSFAIC
QGCLTALGSYNKYHNNCYRDCIALCVLNSATSFVAGFVVFSILGFMSHEQGVHISEVAES
GPGLAFIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASTDMFPRQLRQS
GRRELLILAIAVVCYLIGLLLVTEGGMYVFQLFDYYASSGLCLLFLAVFEVVCISWVYGA
DRFYDNVEDMIGYRPWPLVKISWLFLTPGLCLATFFFSLSKYTPLRYNNVYVYPPWGYSI
GWFLALSSMGCVPLFIIISLLRTRGSFKKRLRQLITPDPSLPQPKAQLSVDGGPSRLPPT
KEALIVGEKETHL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggccatggacggcaaagtggcagtccacgaggatgggcttcctgtggtctcctgggtc
cccgaggagggagagaagctggatcgggaaggccagcagcaggtgaaggaccggggccag
tggaccaacaagatggagtttgtgctgtcagtggccggggagatcattgggctgggcaat
gtctggaggtttccctatctctgctacaaaaacggaggtggagccttcttcattccctac
ttcatcttcttcatcacctgtggcatcccactcttcttcctggaggtggccttgggccag
tacaccagccaggggagcgtcacagcctggaggaagatctgtcccctctttcagggcatc
ggcctggcatctgtggtcatcgagtcctatttgaacatctactacatcatcatcctcgcc
tgggctctcttctacctgttcagctcctttacctcccagctgccctggaccacctgcacc
aactactggaacacagagcattgcatggactttctgaacaagtctggagccagctcagcc
gcctctgcagagaacttcacctcaccggtcatagaattctgggagagacgtgttctgagc
atcacctctggtatccatgatctgggcaccttgcgctgggagctggccctgtgccttctg
ctcgcctggatactctgctacttctgcatctggaagggggtcaagactacaggcaaggtg
gtgtatttcacggccacgttcccctacctgatgctaataatcctcctcatccggggcgtc
acgctgcccggcgcctacgaaggcatcatctactatctgaagcctgacctgctccgtctc
aaggacccccaggtgtggatggacgcaggcacccagatcttcttctccttcgccatctgc
caggggtgcctgacagccctgggcagctacaacaagtaccacaacaactgctacagggac
tgcatcgccctctgcgtcctgaacagcgcgaccagcttcgtggccggcttcgtggtcttc
tccatcctgggcttcatgtcccacgagcagggggtgcacatctcagaggtggccgagtcg
ggtccgggcctggctttcatcgcattccccaaagcggtgacaatgatgcccttgtcgcag
ctgtggtcctgccttttcttcatcatgctgatattcctggggctggacagccagtttgtg
tgtgtggagtgtctggtgacggcgtccaccgacatgtttcccaggcagctgcgccagagt
ggccggcgggagctgctcatcctcgccatcgctgttgtctgctacctcatcgggctcctc
ctggtcaccgagggtgggatgtatgtcttccagctgtttgactattacgcctccagtggc
ctctgcctgctgttcctcgctgtcttcgaggtggtctgcatcagctgggtgtacggggcc
gaccgcttctatgacaacgtggaggacatgattggctaccggccctggcccctggtgaag
atctcctggctcttcctgacccctggactttgcctggccactttcttcttctccctgagc
aagtatacacccctccgatacaacaatgtctacgtgtacccgccctgggggtactccatt
ggttggtttctggctctctcctccatgggctgcgtcccactcttcatcatcatcagcctc
ctgcggacccggggctccttcaagaagcgcctgcgacagctcatcacccccgaccccagc
ctgccgcagcccaaggcccagctgagtgtggatggaggccccagcaggctcccgcccacc
aaggaggccctgatcgttggggagaaggagacccacttgtag
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