Sorex araneus (European shrew): 101539387
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Entry
101539387 CDS
T07854
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04137
Mitophagy - animal
sara04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101539387 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101539387 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sara04121
]
101539387 (AMFR)
Enzymes [BR:
sara01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
101539387 (AMFR)
Ubiquitin system [BR:
sara04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101539387 (AMFR)
Multi subunit type E3
ERAD complex
101539387 (AMFR)
LMBR1L-GP78-UBAC2 complex
101539387 (AMFR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-rbx1
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf-RING_Vps41
zf_RING_Vps8
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
101539387
NCBI-ProteinID:
XP_012788307
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MLVAKLIQYIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGL
VFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLVAMLLSCCGLAAVCCVTGYNHGMHT
LAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMH
HIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELA
VNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRVREDHQ
GENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGITQASNS
QLNAMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRPDSIRPALN
SPMERPSGDLEEGETSAQSERVPLDLSPRLEEASDFSEIEVEPSEGEDFEARGGRFSKSA
DERQRMLVQRKDDLLQQARKRFLNKSSEDDSASESLRRPAEGTTSDPVTLRRRMLAAAAE
RRLQKQQAS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgttggtggctaaactaatccagtatattgtgtttggccctcttcgagtgagcgagaga
cagcacctcaaagacaaattttggaattttattttctacaagttcattttcatttttggt
gtgctgaatgtccagacagtggaagaggtggtcatgtggtgcctgtggtttgctggactt
gtatttctacatctgatggttcagctctgcaaagatcgatttgaatatctctccttctct
cccaccacgccgatgagcagccatggccgggttctgtcgctcctggtcgccatgctgctc
tcctgctgtgggctagcagctgtgtgctgtgtcacaggctacaaccatggaatgcacaca
ttggctttcatggccgcagagtctcttcttgtgacagtgaggactgctcatgtgattcta
cgatacgtaattcatctctgggacctcaaccatgaaggaacctgggaagggaagggaacg
tatgtctattacacagattttgtcatggagctcacactcttgtccttggacctcatgcac
catattcatatgttgttatttggcaacatctggttgtctatggcaagcttggtcatcttc
atgcagctgcgttacctgttccatgaggtacagcgccggatccgtcggcacaagaactat
ttgcgtgtggttgggaacatggaagccaggtttgcagttgccactccagaggagcttgcg
gtcaataatgacgactgcgccatctgctgggactcgatgcaggctgccagaaagcttccc
tgtggacatctcttccacaactcctgtcttcgatcctggttagaacaagacacctcctgc
ccaacgtgcagaatgtctcttaacatcgctgacaataatcgggtccgagaagaccaccaa
ggagagaacctggatgagaatttggttcctgtagcagcagctgaaggcagacctcgctta
aaccaacacaatcacttcttccactttgatggctcccggattgccagttggctgccgagt
ttttcagtggaagtgatgcacaccaccaacattctgggcataacacaggctagcaactcc
cagcttaacgccatggctcatcagattcaagagatgtttccccaagttccctaccacctc
gtgctgcaggacctacagctgacacgctctgtggaaataacgacagacaatattctggag
ggacgaatccaagtccctttccctacacagaggccggacagcattaggcctgcgctcaac
agtcccatggaaaggcccagtggtgacctggaggagggagaaacatctgctcagagtgag
cgtgtgccactggatctcagccctcggctcgaggaggcctcggacttcagtgagatagag
gtggagcccagcgagggggaagactttgaggcgcgaggcggccgcttctccaagtccgcc
gatgagcgacagcgcatgctagtccagcggaaggatgacctgctgcagcaagctcggaag
cgcttcttgaataaaagttctgaagatgattcagcatccgagagtctgcggcgccctgca
gaaggcacgacctccgaccccgtgaccctgcgacgccggatgctggccgctgcggctgaa
cggagacttcagaagcagcaggcctcctag
DBGET
integrated database retrieval system