KEGG   Sorex araneus (European shrew): 101539387
Entry
101539387         CDS       T07854                                 
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
sara  Sorex araneus (European shrew)
Pathway
sara04137  Mitophagy - animal
sara04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sara00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101539387 (AMFR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    101539387 (AMFR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sara04121]
    101539387 (AMFR)
Enzymes [BR:sara01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     101539387 (AMFR)
Ubiquitin system [BR:sara04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101539387 (AMFR)
  Multi subunit type E3
   ERAD complex
    101539387 (AMFR)
   LMBR1L-GP78-UBAC2 complex
    101539387 (AMFR)
SSDB
Motif
Pfam: TPR_SYVN1_N G2BR zf-RING_2 CUE zf-C3HC4_2 zf-C3HC4 zf-RING_11 zf-C3HC4_3 zf-RING_UBOX zf-ANAPC11 zf-rbx1 zf-RING_5 zf-RING_16 Prok-RING_4 zf-C3HC4_4 zf-RING_Vps41 zf_RING_Vps8 RING_Ste5
Other DBs
NCBI-GeneID: 101539387
NCBI-ProteinID: XP_012788307
LinkDB
Position
Unknown
AA seq 549 aa
MLVAKLIQYIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGL
VFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLVAMLLSCCGLAAVCCVTGYNHGMHT
LAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMH
HIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELA
VNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRVREDHQ
GENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGITQASNS
QLNAMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRPDSIRPALN
SPMERPSGDLEEGETSAQSERVPLDLSPRLEEASDFSEIEVEPSEGEDFEARGGRFSKSA
DERQRMLVQRKDDLLQQARKRFLNKSSEDDSASESLRRPAEGTTSDPVTLRRRMLAAAAE
RRLQKQQAS
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgttggtggctaaactaatccagtatattgtgtttggccctcttcgagtgagcgagaga
cagcacctcaaagacaaattttggaattttattttctacaagttcattttcatttttggt
gtgctgaatgtccagacagtggaagaggtggtcatgtggtgcctgtggtttgctggactt
gtatttctacatctgatggttcagctctgcaaagatcgatttgaatatctctccttctct
cccaccacgccgatgagcagccatggccgggttctgtcgctcctggtcgccatgctgctc
tcctgctgtgggctagcagctgtgtgctgtgtcacaggctacaaccatggaatgcacaca
ttggctttcatggccgcagagtctcttcttgtgacagtgaggactgctcatgtgattcta
cgatacgtaattcatctctgggacctcaaccatgaaggaacctgggaagggaagggaacg
tatgtctattacacagattttgtcatggagctcacactcttgtccttggacctcatgcac
catattcatatgttgttatttggcaacatctggttgtctatggcaagcttggtcatcttc
atgcagctgcgttacctgttccatgaggtacagcgccggatccgtcggcacaagaactat
ttgcgtgtggttgggaacatggaagccaggtttgcagttgccactccagaggagcttgcg
gtcaataatgacgactgcgccatctgctgggactcgatgcaggctgccagaaagcttccc
tgtggacatctcttccacaactcctgtcttcgatcctggttagaacaagacacctcctgc
ccaacgtgcagaatgtctcttaacatcgctgacaataatcgggtccgagaagaccaccaa
ggagagaacctggatgagaatttggttcctgtagcagcagctgaaggcagacctcgctta
aaccaacacaatcacttcttccactttgatggctcccggattgccagttggctgccgagt
ttttcagtggaagtgatgcacaccaccaacattctgggcataacacaggctagcaactcc
cagcttaacgccatggctcatcagattcaagagatgtttccccaagttccctaccacctc
gtgctgcaggacctacagctgacacgctctgtggaaataacgacagacaatattctggag
ggacgaatccaagtccctttccctacacagaggccggacagcattaggcctgcgctcaac
agtcccatggaaaggcccagtggtgacctggaggagggagaaacatctgctcagagtgag
cgtgtgccactggatctcagccctcggctcgaggaggcctcggacttcagtgagatagag
gtggagcccagcgagggggaagactttgaggcgcgaggcggccgcttctccaagtccgcc
gatgagcgacagcgcatgctagtccagcggaaggatgacctgctgcagcaagctcggaag
cgcttcttgaataaaagttctgaagatgattcagcatccgagagtctgcggcgccctgca
gaaggcacgacctccgaccccgtgaccctgcgacgccggatgctggccgctgcggctgaa
cggagacttcagaagcagcaggcctcctag

DBGET integrated database retrieval system