Sorex araneus (European shrew): 101539802
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Entry
101539802 CDS
T07854
Symbol
ATG16L2
Name
(RefSeq) autophagy-related protein 16-2
KO
K20868
autophagy-related protein 16-2
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101539802 (ATG16L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101539802 (ATG16L2)
03029 Mitochondrial biogenesis [BR:
sara03029
]
101539802 (ATG16L2)
Membrane trafficking [BR:
sara04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
101539802 (ATG16L2)
Others
Specific organelles associated proteins
Auto phagosome
101539802 (ATG16L2)
Mitochondrial biogenesis [BR:
sara03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101539802 (ATG16L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
ATG16
WDR55
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
101539802
NCBI-ProteinID:
XP_004618321
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MAGPRDPGAPAARWKRHIVRQLRQRDRTQKALFLELVPAYNRLLEKAALLAHVSEKLQPE
PDSTTSAPNPWEEALGADSDQHPSADALRGKWQAEEERLRLVCGELLADTRYTPGAGDAA
VSEQASAETVTVCQMAYQVVEKRAALGALERNLRNERRERAKQAHVSQELRKATKRTVSI
SENPEPPDFPGDGVREAARSVAPAVQPQAREREARETRRRPFRSASATSLMLSRCVGVVK
GLLDFKKRRGHSVGGAPEQCYQSLPVCVAARLPAWAQDVRDAHLSEVNAVRFGPHSSLLA
TGGADCLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGAQVLAATYNQAAQLWTVGES
QSKETLSGHTDKVTAARFKLTRHQAVTGSRDRTVKEWDLHRACCSRTIPVLSYCNDVVCG
DHVIISGHNDQKIRFWDSRGPCCTQVIPVQGRVTSLSLSQDQLHLLSCSRDDTLKVIDLR
ASNIRQVFRADGFRCASDWTKAVFSPDRHYAVAGSGDGALYIWDVDTGKLQSSLQGPHCS
AINAVAWCYSGGHVVSVDQARKAVLWS
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaccccgcgacccgggtgccccggcagcccgctggaaacgccacatcgtgcgg
cagctgcggcagcgggaccgcacgcagaaggcccttttcctggagctggtgccggcctat
aaccgtctcctagagaaggctgcgctgctggcccacgtctccgagaagctgcagccagag
cccgacagcaccacctctgctccgaacccctgggaggaggcgctgggggctgactcagac
cagcatccatcagcagacgctctgagggggaagtggcaagcggaggaggagaggctccgg
ctggtgtgtggtgagctgcttgcggacactcgctacaccccaggtgcaggggacgcagca
gtgagcgagcaggcctcggcagagacggtcacagtgtgccaaatggcctaccaggtggtg
gagaagcgcgcggcgctgggcgccctggagcgcaacctgcgcaacgagcgccgcgagagg
gcgaagcaggcgcacgtgtcccaggagctgaggaaggccaccaagcggaccgtgagcatc
agcgagaaccccgaaccccccgatttcccaggcgatggggtcagggaggcagctaggagt
gtggcccccgccgtgcagccccaggcccgggagagagaggctagggagacgcgcaggaga
cccttcaggtcagcctccgccacgtccctgatgctgtcccgctgtgtaggtgtggtgaag
ggcctcctggatttcaagaaaaggagaggccactccgttgggggcgcacccgagcagtgc
taccagagcctccccgtgtgtgtggccgcccggctccctgcctgggcgcaggatgtgagg
gacgcccacctgtcggaggtgaatgccgtccgctttggcccccacagcagcctcctggcc
accggcggggccgactgcctcatccacctgtggaacgtggttggcggtcgcctggaggcc
aaccagactctggagggggctggcggcagcatcaccagtgtggacttcgatccctcgggc
gcccaggtcctagcggccacttacaaccaggctgcccagctctggacggttggggagtca
cagtccaaggagacgctgtctggacacacagacaaggtgacggccgccaggttcaagctc
actaggcaccaggcggtgacgggcagccgcgaccggacggtgaaggagtgggacctgcac
cgcgcctgctgctccaggaccatccctgtcctttcctactgcaacgacgtggtgtgcggg
gaccacgtcatcatcagcggccacaatgaccagaagatccgcttctgggacagcaggggg
ccgtgctgcacccaggtcatccccgtgcagggccgggtcacctccctgagtctcagccag
gaccagctgcatctgctcagctgttcccgcgacgacacgctcaaggtcatcgacctgcgc
gccagcaacatccgccaggtgttcagggccgatggcttcaggtgtgcgtctgactggacc
aaagctgtgttcagccctgaccgacactatgctgtggccggctctggggacggggccctc
tacatctgggatgtggacacggggaagctgcagagcagcctgcagggaccccattgctct
gccatcaacgccgtggcctggtgttactccggcggccatgtggtgagcgtggaccaggcc
aggaaggccgtgctctggagctag
DBGET
integrated database retrieval system
