Sorex araneus (European shrew): 101540001
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Entry
101540001 CDS
T07854
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sara04121
]
101540001 (RLIM)
Enzymes [BR:
sara01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101540001 (RLIM)
Ubiquitin system [BR:
sara04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101540001 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
101540001
NCBI-ProteinID:
XP_004620969
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MESSDSNDKGSDQSAAQRRSQMDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGESTE
EELLRRLQQIKEGPPPQNSDENRGDSSDDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQSW
RAVSRTNPNSGDFRFSLEINVNRNNGGQNPENENEPSARRSSGENLDNSQRQIESPRSDS
TSARPSRSERNSSEAVMAEVLPTRGQRRARSRSPDHRRTRARAERSRSPLHSVSEIPRRS
HHNITSQTFEHPLVNETEGSSRTRHHVTLRQQISGPELLSRGLFAAPGARNASQGAASSD
TPSPGESIAPGQRPPTIVLDLQVRRVRPGEYRQRDSIASRTRSRSQTPNNTVTYESERGG
FRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYS
DSDSEPSGPVSSRNMERAEPRSGRGGSGGNSSSGSSSSSSSSSSSSSSSSPSSSSSGESS
ETSSEVFEGSNEGSSSGSSGARREGRHRAPPTVTFDESGSLPFLSLAQFFLLNEDDDDQP
RGLTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENS
TCPICRRAVLTSGNRESIV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttcagattctaacgataaaggaagtgatcagtctgcagcacaacgcagaagt
cagatggaccgattggatagagaagaagctttctatcaatttgtaaataacctgagtgaa
gaagattacagacttatgagggataacaacttactaggcaccccaggtgaaagtacagag
gaagaattgctgagaagactgcaacaaataaaagagggtcctccaccacaaaactcagat
gagaatagaggagactcttcagatgatgtgtctaatggtgattctataatagactggctt
aactccgtccgacaaactggaaatacaacaagaagtggacaaagaggaaaccaatcttgg
agagcagtgagccgaactaatccaaatagtggtgattttagattcagtttagagatcaat
gttaatcgtaataatgggggccaaaacccagagaatgaaaatgagccatctgcaagacgt
tctagtggagagaatttggacaatagccaaaggcagatagaaagtccacgatctgattca
acatctgcaaggccatctagatcagaacgaaattcatctgaagccgtaatggcagaagtt
ttacctaccagaggccagagaagggcaaggagcaggagcccagaccatcggcgaaccaga
gccagagctgaaagaagtaggtcacctctgcattcagtgagtgaaattccacgacgatct
catcataatatcacttctcagacttttgagcatcctttggtaaatgagactgagggaagt
tctagaacccggcaccacgtgacattaagacagcaaataagtgggcccgagttgctaagt
agaggtctttttgcagcacctggagcaagaaacgcttctcaaggagcagcatcttcggac
acacccagccctggtgaatctatagcgccaggacagagaccgccaaccatagtgcttgat
cttcaagtaagaagagttcgtcctggggaatatcggcaaagagatagcatagctagcaga
acccggtcaaggtctcagacaccaaacaacactgttacatacgaaagtgaacggggaggt
tttaggcgcacattttcacgttctgaaagagcaggagtgcgaacctacgtcagtaccatt
agaattcccattcgtagaatcttaaatactggtttgagtgagactacatctgttgcgatt
cagaccatgttaaggcagataatgacaggttttggagagctaagttacttcatgtacagt
gatagtgattccgagcctagtggcccagtctcaagtcggaatatggaaagggcagagcca
cggagtggaagagggggttctggtggtaatagcagttctggatccagctccagctccagc
tccagctccagttcgagttcaagctccagtcctagttcaagttccagtggtgaaagttca
gagactagctcagaggtatttgaaggcagtaatgaaggaagctcatcaggttcatcaggt
gccaggcgagagggccgacacagggccccccctacagtaacatttgatgaaagtggctct
ttgcctttccttagcctggctcagtttttcctcttaaatgaggatgatgatgatcaacct
agaggactcaccaaagaacagattgacaacttggcaatgagaagtttcggcgaaaatgat
gcattaaaaacctgcagtgtttgcattacagaatacacagaaggcaacaaacttcgtaaa
ttaccttgctcccatgagtaccatgttcactgtattgatcgctggttatctgagaattct
acttgtcctatttgtcgcagagcagtcttaacttctggtaacagagaaagcattgtgtaa
DBGET
integrated database retrieval system