Sorex araneus (European shrew): 101540171
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Entry
101540171 CDS
T07854
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03082
ATP-dependent chromatin remodeling
sara05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101540171 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
101540171 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sara03036
]
101540171 (SS18L1)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101540171 (SS18L1)
GBAF(ncBAF) complex
101540171 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
101540171
NCBI-ProteinID:
XP_004620330
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MLDENHHLIQCILEYQSKGKTAECTQYQQALHRNLVYLATIADSNQNMQSLLPAPPTQTM
NLGPGALPQGASGQGLHTQGSLSDAIGSGLPAASLMQGQIGNGPNHVPMQQTAPSTLPTT
SMSMSGSGHGSGPGYSHAGPSQSVSLQGQGAMGSYVSRANINMQSNPVSMMHQQAASSHY
SSAQGGGQHYQNQPALAMMGPGGQGSSLMSQRPLAPYRPSQQGSSQQYLGQEEYYSGEQY
GHGQAASEPMSQQYYPDGHSEYAYQQPSYTEQSYDRSFEESTQHYYEGGSSQYSQQQAGY
QQGATPQQAGYQQQYPGQQGYPGQQQGYGPAQGAPSQYPSYQQGQGQQYGSYRAAQSGPS
AQQQRPYGYEQGQYGNYQQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgctggacgagaaccaccacctgatccagtgcatcctggagtaccagagcaagggcaag
acagccgagtgcacccagtaccagcaggccctgcaccggaacctggtctacctggccacc
atcgcggactccaaccagaacatgcagtccctgctgcccgccccgccgacccagaccatg
aacctgggtcctggggcactgccccagggcgcctccggccagggcctacacacccagggc
agcctcagcgatgccattggctccggcctgcctgcagcgtcactcatgcagggccagatc
ggcaacggccccaaccacgtgcccatgcagcagacagcccccagcacgctgcccaccacc
tccatgagcatgtcgggcagcggccacggctcaggacccggctacagccacgcgggcccc
tcacagagcgtgtccctgcagggccagggcgccatgggcagctacgtgtcccgggccaac
atcaacatgcagtccaacccagtgtccatgatgcaccagcaggcagcctcgtcccactac
agctcggcgcagggcggcggccagcactaccagaaccagccggccctggccatgatgggc
cccggcgggcagggcagcagcctgatgagccagcggcccctggcgccgtaccggccctca
cagcaaggctcgtcccagcagtacttgggccaggaggaatactacagcggagaacagtat
ggccacggtcaggccgcctcggagcccatgagccagcagtactaccccgacgggcacagc
gagtatgcctaccagcagccgtcctacacggagcagagctacgatcgctccttcgaggag
tccacacagcactactacgagggcggaagctcccagtacagccagcagcaagccggctac
cagcagggcgcgaccccgcagcaggccggctaccagcagcagtaccctggccagcagggt
taccctgggcagcagcagggctacgggccggcgcagggtgccccatcgcagtaccccagc
taccagcagggacaagggcagcagtacgggagctaccgagcggcccagagcggcccgtcc
gcccagcagcagcggccttacggctacgagcagggccagtatggaaactaccagcagtaa
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integrated database retrieval system
