Sorex araneus (European shrew): 101540364
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Entry
101540364 CDS
T07854
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03420
Nucleotide excision repair
sara03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101540364 (ERCC4)
03460 Fanconi anemia pathway
101540364 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sara03032
]
101540364 (ERCC4)
03400 DNA repair and recombination proteins [BR:
sara03400
]
101540364 (ERCC4)
DNA replication proteins [BR:
sara03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
101540364 (ERCC4)
DNA repair and recombination proteins [BR:
sara03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
101540364 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
101540364
NCBI-ProteinID:
XP_004604386
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MEPGRRASRLAMAPLLEYERQLVLELLEADGLVVCARGLGADRLLYHFLRLHSHPACLVL
VLNTQPAEEEHFINQLKLDGVNHLPRRVTNEIASNSRYEVYTQGGVIFATSRILVVDFLT
DRIPSDLITGILVYKAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVER
VMRNLFVRKLYLWPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTALLDILNACLKEL
KCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLSQ
YDCVTFLNLLESLRATEKAFGQNSGWLFLDASTSMFVNARARVYHIPDTKLSKKDKIPEK
VETKEKQETKRELVLENSPKWEALTEVLKEIEAENQESEALGGPGQVLICASDDRTCTQL
REYLSCGAEAFLLRLYRKTFEKEKDGPAEEDWARFRKEDCARRGVKSGKGPKGRARAKER
TAKKKKKLTLTQMVAKTEEPEGEEGEAPAGLAGDPSSSPEGCPEEAAPEDFAVNVSSDAA
YGLLRDPLTILHPLLGCSDPYALTRVLYELEPRYVVLYDAELTFVRQLEIYRASRPGRPL
RVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVIPEEREGRDETNLDLARGSTSS
DVTPDTRKAGGQAQGGPAQSIVVDLREFRSELPALIHRRGIDVEPVTLEVGDYILSPDMC
VERKTLSDLIGSLNNGRLYGQCVSMGRYYPRPLLLIEFNPGRALALGARGAPQPELSGAD
VTAKLALLTLHFPRLRLLWCPSPHAAAELFEELKRHKPQPDAAAAAAVTADSDTLPESDR
YNPGPQDFLLRMPGVSAKNCRALMNRVRSIAELAGLSQAQLADVLGNAASARQLHDFIHT
PYTAAAPGPALAKGKGKK
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggacggcgggcttcccgcctggccatggcgccgctgctggagtacgagcgg
cagctggtgctggagctgctcgaggccgacgggctggtggtgtgcgcccgcgggctcggc
gcggatcggctcctctaccacttcctccggctgcacagccacccggcgtgcctggtgctg
gtgctcaacacgcagccggccgaggaggagcatttcatcaaccagctaaagctggacggc
gtcaaccacctgccccgccgcgtgaccaacgaaatcgccagtaacagtcgctacgaggtg
tacacgcagggcggggtgatcttcgccaccagccggatcctcgtggttgacttcctgacg
gacaggatcccttctgatttgattactggcatcttggtgtacaaagctcaccggatcatc
gagtcttgtcaggaagccttcatcctgcgcctctttcgccagaagaacaaacgcggcttc
atcaaagccttcacagacaacgccgtggcctttgacaccggcttctgccacgtggaaaga
gtgatgcgaaacctcttcgtccggaagctgtacctgtggcccaggttccatgtggccgtg
aactcgtttttagaacagcacaagcccgaggtggtagaaatccacgtttctatgacgccg
gccatgctggccatccagaccgccctgctggacatcctgaacgcgtgtctcaaggagctc
aagtgccacaacccgtcgcttgaagtggaagatttatccctcgaaaatgccatcgggaaa
ccttttgacaagaccatccgccactatttggaccccctgtggcatcagctgggcgccaag
accaagtccttggttcaggacctgaagatcctgcggacgctgctgctgtatctctcccag
tacgactgcgtcaccttcctcaacctcctggagtcactgagggcgaccgagaaggcgttt
ggtcagaattcagggtggctgttccttgacgccagcacctcgatgtttgtgaatgctcga
gcacgggtgtaccacattccagataccaaactgagcaaaaaggacaaaataccggaaaaa
gtggagacgaaagaaaagcaagaaacaaagagggagctcgtcctcgagaacagccccaag
tgggaagctctgacggaagtgctgaaagaaatcgaggcagagaaccaggagagcgaagcc
ctggggggtccaggccaggtgctcatctgcgccagtgacgaccggacgtgtacccagctg
cgggagtatctgtcctgcggcgccgaggccttcctactgaggctgtaccggaaaaccttt
gagaaggagaaggacggcccggccgaggaggactgggcgcggttcaggaaggaggactgc
gccaggagaggggtgaaatccggcaaaggacccaagggccgcgcccgggccaaagagagg
acggcgaagaagaagaagaagctgaccctcacgcagatggtggccaagaccgaggagccg
gaaggggaagaaggggaggccccggcgggcctcgccggagacccgagcagcagcccggaa
ggctgcccggaagaagccgcgcccgaggacttcgccgtgaacgtgtcatcggatgctgcc
tacggcctcctcagggaccccctgaccatcctccacccgctgctggggtgcagcgacccc
tacgccctgaccagggttctgtacgagctggagccgagatacgtggttctgtacgacgcc
gagctgaccttcgtgcggcagctcgagatttacagggcaagtagacctggccgacctctg
agggtctatttccttatctacgggggctcgaccgaggagcagcgttacctcacggccctg
cggaaggagaaagaggcgtttgagaaactcatcagggagaaggccagcatggtcatcccc
gaggagcgagagggccgcgacgagacaaacctggacctggccaggggctccacgtccagc
gacgtcacccccgacacgcgtaaagcgggtggccaggcccagggcggccccgcgcagagc
atcgtggtggacctgcgcgagttccgcagcgagctgcccgcgctcatccaccggcggggc
atcgacgtggagcccgtgacgctggaggtgggcgactacatcctgagccccgacatgtgc
gtggagcgcaagaccctcagcgacctcatcggctccctgaacaacgggcgcctgtacggc
cagtgcgtgtccatgggccgctactacccgcggccgctgctgctcatcgagttcaacccg
ggccgcgccctggcgctgggggcgcgcggcgcgccgcagcccgagctgtccggcgccgac
gtcacggccaagctggccctgctgaccctgcacttcccccgcctgcgcctgctctggtgc
ccgtccccgcacgccgccgccgagctcttcgaggagctcaagcgccacaagccgcagccc
gacgcggccgccgccgccgccgtcaccgccgactcggacacgctgcccgagtccgaccgc
tacaacccgggcccgcaggacttcctgctgcgcatgcccggggtcagcgccaagaactgc
cgcgcgctcatgaaccgcgtgcgcagcatcgccgagctggccggcctttcgcaggcgcag
ctggccgacgtgctgggcaacgcggccagcgcccggcagctgcacgacttcatccacacg
ccctacacggcggccgcgcccggccccgcgctggccaagggcaaagggaagaagtga
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