Sorex araneus (European shrew): 101540443
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Entry
101540443 CDS
T07854
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03008
Ribosome biogenesis in eukaryotes
sara03013
Nucleocytoplasmic transport
sara03015
mRNA surveillance pathway
sara05014
Amyotrophic lateral sclerosis
sara05164
Influenza A
sara05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101540443 (NXF1)
03015 mRNA surveillance pathway
101540443 (NXF1)
03008 Ribosome biogenesis in eukaryotes
101540443 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101540443 (NXF1)
05168 Herpes simplex virus 1 infection
101540443 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101540443 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101540443 (NXF1)
03009 Ribosome biogenesis [BR:
sara03009
]
101540443 (NXF1)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101540443 (NXF1)
mRNA cycle factors
Stress granule specific factors
101540443 (NXF1)
Ribosome biogenesis [BR:
sara03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
101540443 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
UBA_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
101540443
NCBI-ProteinID:
XP_004621573
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MADEGKPYNEHDDRVTFHQRRKKGRGPFRWKYGDGNRRSGRGGAGVRTPRLEDEDRDVAM
SDAQDGPRVRYNPYTPRPNRRGGDAWHDRDRIHVTVRRDRAPPDRGAAGTSQEGVSRNWF
KITIPYGRKYDKSWLLSVIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAINYKIS
DRENRRISIIINPSFPPQTVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRTDADLVA
QNIDVVLNRKSCMAATLRIIEENIPELLSLNLSNNRLYRLDEMASIVQKAPNLKILNLSG
NELKSERELDKIKGLKLEELWLDGNPLCDSFRDQSTYISAVRERFPKLLRLDGHELPPPI
AFDVEAPTALPPCKGSYFGTEALKNLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSI
PFTPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSFV
VDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVRNAS
PDESQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSA
QAFTLLKAKDKIPEVAFMK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggggaagccgtacaacgagcatgatgaccgcgtcaccttccatcagagg
aggaagaagggccgaggtcctttccgatggaagtatggggatgggaaccgtcggtccgga
agaggaggtgctggcgttcggacaccccgccttgaggacgaggacagagatgtggcaatg
agtgatgcccaggacggtccccgagtgcgatacaacccctacacaccgcgacccaaccgt
cggggaggcgacgcctggcacgatcgggaccgtattcacgtcaccgtgcggagggacaga
gcgcctcccgacagaggcgccgctggcaccagccaggaaggggtgtcaaggaactggttc
aagattacaattccttacggcaggaagtacgataagtcatggctcctgagcgtgattcag
agcaaatgcagcgtccctttcacccccattgagtttcactatgaaaacacacgggcccag
ttctttgttgaggatgccagtaccgcctctgcgctgaaggccatcaactataagatctcg
gaccgggagaaccgtaggatatccatcatcatcaacccctcgtttccgccccagacggtc
cagaatgagctgaagcctgagcaggtggagcagctaaagcttatcatgagcaaaagatac
gatggctcccaacaagcgctggacctcaaaggcctccgtacagacgcagacttggtggcc
cagaacatagacgttgtcctgaaccggaaaagttgtatggcggcgaccctgcgaatcatc
gaagagaatatccccgagctcttatccttgaacctgagcaacaataggctctacaggctg
gacgaaatggccagcatcgtgcagaaggcccccaacctgaagatcctgaacctctccgga
aacgagttgaagtccgagcgggagctagacaagatcaaagggctcaagctggaagagctc
tggctggacgggaacccgctgtgcgactccttccgagaccagtccacctacattagcgcc
gttcgagaacgattccccaaattactgcgcctggatggccacgagttacccccgcctatt
gcctttgacgtggaggcgcccacagcgctgccgccctgcaagggaagctactttggcacc
gaggccctgaagaatctggtcctgcacttcctacagcagtactatgcaatctatgactct
ggagaccggcagggactcctggacgcctaccacgacggggcgtgctgctccctgagtatc
cccttcaccccccagaaccccgcacgaagcaacctggctgagtacttcaaggacagcagg
aatgtgaagaagctgaaagaccccaccctgcggttccgcctgctgaagcacacgcgtctc
aatgtcgttgccttcctcaacgagctgcccaagactcagcatgatattaactccttcgtg
gtcgacataagtgcccagactagcacgctgctgtgtttctctgtcaatggcgtcttcaag
gaagtggacgggaagtcccgggattccttgcgagccttcacgcggacgttcatcgctgtt
cctgccagcaattcagggctgtgcatagtgaatgacgagctgtttgtgcggaacgccagc
cctgatgagagccaaagagccttcgccatgcctgcacccacgccttcctccagcccagtg
cccaccctctccccggagcagcaggaaatgctgcaggccttctccacgcagtctggcatg
aacctcgagtggtcccagaaatgtctgcaggacaacaactgggactataccaggtctgcc
caggccttcactcttctcaaggccaaggacaagattcctgaagtggctttcatgaagtga
DBGET
integrated database retrieval system
