Sorex araneus (European shrew): 101540469
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Entry
101540469 CDS
T07854
Symbol
L1CAM
Name
(RefSeq) neural cell adhesion molecule L1 isoform X3
KO
K06550
L1 cell adhesion molecule
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04360
Axon guidance
sara04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101540469 (L1CAM)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101540469 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sara04515
]
101540469 (L1CAM)
04090 CD molecules [BR:
sara04090
]
101540469 (L1CAM)
04091 Lectins [BR:
sara04091
]
101540469 (L1CAM)
Cell adhesion molecules [BR:
sara04515
]
Immunoglobulin superfamily
L1 family
101540469 (L1CAM)
CD molecules [BR:
sara04090
]
Proteins
101540469 (L1CAM)
Lectins [BR:
sara04091
]
I-type lectins (Siglecs)
101540469 (L1CAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
Izumo-Ig
BiPBP_C
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
101540469
NCBI-ProteinID:
XP_004606561
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MAVALRYLWSLLLCSPCLLIQIPEELMEPPVITAESPRRLVVFPTDDISLKCEARGRPQV
QFRWTRDGVHFKPHEEVGVTVHQAPHSGSFTITGNNSNFAQRFQGTYRCFASNQLGTAMS
QETWLMAEGAPKWPKETVKPVEVEEGESVVLPCHPPPSAEPLRIYWMNSKILHIKQDERV
TMGQNGNLYFANVLISDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFP
TNSSSYLVALQGQPLVLECIAEGFPTPSIKWLRLSGSMPTDRVIYQNHNKTLQLLNVSEE
DDGKYRCLAENSMGSARHDYEVIVEAAPYWLRKPENELYAPGETARLDCQVQGRPQPQVT
WRINGIPVNELAEDQKYQIQQGPLSNLVLSNLKPSDSMVTQCEARNRHGVLLANAYIYVV
QLPTKILTADNETYLAVEGSSAYLLCKAFGAPVPSVQWLDQEGKSVLQDERFFPYTNGTL
GIHELHINDTGHYFCQAANDQNNVTIVANLQVKAATRITQGPRSAIEKKGSRVTFACHAT
FDPSLQARITWRGAGRDLQELGDSDKYFIEDGHLVIYSLDYSDQGNYSCVASTKLDTVES
QAELLVVGSPGPVSRLEVVDRHLLKQNQVRLTWSPADDHNAPIEKYDIEFKDKEMEPEKW
RSLGKVTGNQTSSILKLSPYVHYTFRVTAINRYGPGEPSPDSETVATPEAAPEKNPRDVK
GEGNQTDNMVITWQPLEWMDWNAPQLQYRVQWRPRGSHGPWQEQTVEQPFLVVSNTSTFI
PYEIRVQAVNSQGKGPEPQVTVGYSGEDYPQAKPQLEDIEIVNSSTVLVRWRHVEPATVR
GHLRGYNVTYWWVSSQRRHSKRHTSREHVVVPANATSATLGGLRPYSNYELELRVFNGRG
LGPASTQFFRTPEGVPGQPEALQLECLSDTSLQLHWQPPLRPNGELTGYVLSYQPLDDGD
QDGLSFDLPNPDMRTQNLTNLSPQQRYRFQLQATTKEGPGKAIVREGGTMALSGTLDFGN
ISTITGENYSVVSWVPRESQCNFGFKILFKSLGSEKEKVAEQDVSYNQRSYTQWDLQPDT
EYEIRLLKESRVLHKISVKTNGTSRVPLSPAGFATEGWFIGFVCAIILLLLILLILCFIK
RSKGGKYSVKDKEDTQVDSEARPMKDETFGEYSDNEEKGFGSSQPSLNGDIKPLGSDDSL
ADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGHDSSGAASPVNPSGALE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggcgctgcggtacttgtggtctctcctgctgtgcagcccgtgcctgctcatc
cagatccccgaggaattgatggagccacctgtcatcaccgcagagtccccacggcgcctg
gtggttttccccacagatgacatcagcctcaagtgtgaggccagagggagaccccaagta
cagttccgctggactcgggatggtgtccacttcaaaccacacgaggaagtcggggtcact
gtgcaccaggcaccccactcgggctccttcaccatcacaggcaacaacagcaattttgcg
cagaggttccagggcacctaccgctgctttgccagcaaccagctgggcactgccatgtcc
caggagacgtggctcatggctgagggtgcccccaagtggcccaaggagacggtgaagccc
gttgaggtggaggaaggggagtcggtggttctgccctgccacccgccgcccagcgcagag
ccacttcggatctactggatgaatagcaagatcttgcacatcaagcaggatgagcgggtg
accatgggccagaatggcaacctgtacttcgccaacgtgctcatatcggataaccactca
gactatatctgccatgcgcacttcccaggcacccgcaccatcattcagaaggagcccatt
gacctccgggtcaaggccaccaacagcatgatcgacaggaagccccgcctgctcttcccc
accaactccagcagctacctggtggctttgcagggacagccgctggtcctggagtgcatc
gccgagggtttccccactcccagcatcaagtggctgcgcctgagcggctccatgccaacc
gaccgcgtcatctaccagaaccacaacaagacgctacagctgctgaatgtgagcgaggag
gatgacggcaagtaccgctgcttggctgagaactcgatgggcagcgcccggcacgactac
gaagtcatcgtggaagctgccccttactggctgcgaaagccagagaacgagctgtatgca
ccgggagagacagcccgcctggactgccaagtgcagggccggccccagccgcaggtcacc
tggagaatcaatgggatccctgtgaacgagctggccgaggaccagaagtatcagatccag
caagggcccctgagcaacctggttctgagcaacctgaagcccagtgactctatggtgacc
cagtgtgaggcccgcaaccggcatggtgtcttgttggccaatgcatacatctatgtcgtc
cagctgccgactaagatcctgactgcagacaatgagacgtacctggcggtggagggtagc
agcgcctacctgctgtgcaaggcctttggggcccctgtgcccagtgttcaatggctggac
caggagggcaagagcgtactacaggatgagcgcttcttcccctacaccaatggcaccctg
ggcatccacgagctgcacatcaatgacactggccactacttctgccaggcggccaatgac
cagaacaatgtgaccattgtggctaacctgcaggtcaaagctgccacgcggatcacacag
ggaccccggagtgccatcgagaaaaaaggctcaagggtcacatttgcatgtcacgctacc
tttgacccatccctgcaagctcgcatcacctggcggggggccggccgtgacctgcaggag
ctcggagacagtgacaagtacttcatagaggacgggcacctggtcatttacagcctggac
tatagcgaccaaggcaactacagctgtgtggccagcaccaaactggacacggtggagagc
caggccgagctcctggtggtagggagccctggcccagtgtcccgacttgaggtagttgac
cgccacctgctgaaacagaaccaggtgcgtctgacatggagccctgccgacgaccacaat
gcgcccatcgaaaagtatgacatcgaattcaaggacaaggaaatggagcctgagaaatgg
cgcagtctgggcaaggtgaccggaaaccagacctccagcatcctcaagctgtcaccctat
gtccactacacctttcgggtcactgccatcaacagatatggccccggcgagcccagtccg
gactctgagaccgtggccacaccggaggcggcccctgaaaagaaccccagggacgtgaag
ggtgaagggaaccagaccgacaacatggtcatcacgtggcagcctcttgagtggatggac
tggaacgcgccgcagctgcagtaccgcgtgcagtggcgcccacggggctcccacggaccc
tggcaggagcagactgtggagcagcccttcctggtggtctccaatacgtccaccttcata
ccttatgagatcagggtgcaggcggtcaacagccagggcaagggcccagagcctcaggtc
accgtgggctactcgggcgaggactacccccaggcgaaaccgcagctggaagacattgaa
atcgtgaactccagcacggtgctggtcaggtggaggcacgtggagccagcaacagtcagg
ggccacctgcggggctataacgtgacttactggtgggtgagcagtcagcggaggcacagt
aagaggcacacgagccgagagcacgtggtggtccccgccaacgccaccagcgccaccctg
gggggccttcggccctacagcaactacgagctggagctgcgggtcttcaacggccggggc
ctggggcctgcctccacacagttcttccggacacctgagggagtgcccggccagccagaa
gcgctgcagctggagtgcctgtcagacaccagcctgcaacttcattggcagcccccgctt
cgccccaacggggagctcactggctacgtgctttcctaccagcccttggatgatggggac
caggacgggctgtcctttgacctgcctaaccctgacatgcgcacccagaacctgaccaat
ctcagcccccagcagcgttaccgcttccagctacaggccaccacgaaggaggggcctggc
aaagccattgtgcgtgagggtggcaccatggccttgtccgggaccttggattttggcaac
atctcaaccatcacgggcgagaattacagcgtggtctcctgggtgcccagggagagccag
tgcaacttcgggttcaagatcttgttcaaatctcttgggagtgagaaggagaaggtggcc
gagcaggatgtcagctataaccagaggtcgtacacgcagtgggacctgcagccagacact
gagtacgagatccgtctgctcaaggagagcagggtcctgcacaagatatccgtgaagacc
aatggcaccagccgggtgccactctcgcctgctggcttcgccaccgagggctggttcatc
ggtttcgtgtgcgccatcattctcctgctcctcatcttgcttatcctctgcttcatcaag
cgcagcaagggcggcaagtattcagtgaaggacaaagaggatacccaggtggactccgag
gcccggcccatgaaggatgagacgtttggggagtacagtgacaacgaggagaaaggcttt
ggcagcagccagccgtcgctcaatggggacatcaagccgctgggcagtgatgacagcctg
gccgactatggcggcagcgtggacgtgcagttcaacgaggatggctcgttcatcggccag
tacagcggcaagaaggagaaggaggcagcagggggccatgacagctcgggggccgcctcc
cccgtcaacccctcgggggctctggagtag
DBGET
integrated database retrieval system
