Sorex araneus (European shrew): 101540508
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Entry
101540508 CDS
T07854
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04120
Ubiquitin mediated proteolysis
sara04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101540508 (SYVN1)
04120 Ubiquitin mediated proteolysis
101540508 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sara04121
]
101540508 (SYVN1)
Enzymes [BR:
sara01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101540508 (SYVN1)
Ubiquitin system [BR:
sara04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101540508 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
101540508
NCBI-ProteinID:
XP_004618577
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MDDAAFRRQNSPLATDSLCPQAGAMFRTAVVMAASMALTGAVVAHAYYLKHQFYPTVVYL
TKSSPSMAVLYIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFR
DDFSPRFVALFTLLLFLKCFHWLAEDRVDYMERSPNISWLFHCRIVCEWDPAAGLRGPAP
SGQARGTALMCLLGVLDFFFVSHAYHSILTRGASVQLVFGFEYAILMTMVLTIFIKYVLH
SVDLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTFPLFAIRPMYLAMRQF
KKAVTDAIMSRRAIRNMNTLYPDATPEDLQAMDNVCIICREEMVTGAKRLPCNHIFHTSC
LRSWFQRQQTCPTCRMDVLRASLPTQSPAPPEPADQGPPPAPHHQPDWLHAANFPPGLLP
PFPPGMFPLWPPMAPFPPVPPPPSSGEASAPSTSAGFPFPPPWMGMPLPPPFAFPPMPVP
PAGFAGLTPEELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGYEARV
LGLVLLGATRRALQALQPTGLPSGELLKAPPESVGAAGAEEQLEDGEPDAAELRRRRLQK
LESPVTH
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgcagctttccggaggcagaactctcctttggccactgatagcctatgtccc
caggccggggcaatgttccgcaccgccgtggtgatggcggccagcatggcactgaccggg
gccgtggtggcgcacgcctactacctcaagcaccagttctaccccactgtggtgtacctg
accaagtccagccccagcatggccgtcctgtacatccaggccttcgtgctggtcttcctc
ctgggcaaggtgatggggaaggtgttcttcgggcagctccgggcggccgagatggagcac
cttctggaacggtcgtggtatgcggtcactgagacgtgtctggccttcaccgtctttcgg
gacgacttcagcccccgtttcgtggcgctcttcaccctcctcctcttcctcaagtgtttc
cactggctggcggaggaccgcgtggactacatggagcggagccccaacatctcctggctc
tttcactgccgcatcgtgtgtgagtgggacccggcggcggggctgcggggcccggcaccc
tccgggcaggcccggggcacagccctcatgtgcctgctgggcgtcctggacttcttcttc
gtcagccacgcctaccacagcatcctgacgcggggcgcctccgtgcagctggtgtttggc
tttgagtacgccatcctgatgaccatggtgctcaccatcttcatcaagtacgtgctgcac
agcgtggacctgcagagcgacaacccctgggacaacaaggccgtgtacatgctgtacaca
gagctgttcacaggcttcatcaaggtcctgctgtacatggccttcatgaccatcatgatc
aaggtgcacacgttcccgctcttcgccatccggcccatgtacctggccatgaggcagttc
aagaaagcggtgacggacgccatcatgtcccgccgggccatccgcaacatgaacacgctg
taccctgacgccaccccagaggacctgcaggccatggacaacgtctgcatcatctgccgg
gaggagatggtgaccggggccaagaggctgccctgcaaccacatcttccacaccagctgc
ctgcgctcctggttccagcggcagcaaacctgtcccacctgccgcatggacgtcctgcgg
gcgtccttgcccacccagtcgccagcgccccccgaacctgcggaccaggggccaccccct
gccccccaccaccagcctgattggctccatgccgccaattttccccccggcctcctgccc
cccttccctccgggcatgtttccgctgtggccgcccatggctcccttcccgcctgtcccg
ccgcccccgagctctggagaggcctcggccccatccaccagtgccggcttccccttcccc
cctccctggatgggcatgcccctgccgcccccctttgccttccccccgatgcccgtgccc
cccgctggcttcgccgggctgacccccgaggagctgcgcgcactggaaggccacgagcgg
cagcacctggaggcgcggctgcagagtctgcgcaacatccacacgctgctggacgccgcc
atgctgcagatcaaccagtacctcaccgtgctcgcctccctggggtacgaggcccgggtg
ctgggcctagtcctgctgggggccacgcgccgggccctccaggcactgcagccgacagga
ctcccctcgggggagctgctaaaggcgccccccgagtcagtgggcgctgccggcgccgag
gagcagctggaggacggagagccggacgccgctgagctccgccgccgccgcctgcagaag
ctcgagtccccggtcacacactga
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