Sorex araneus (European shrew): 101540728
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Entry
101540728 CDS
T07854
Symbol
FGD1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101540728 (FGD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sara04990
]
101540728 (FGD1)
Domain-containing proteins not elsewhere classified [BR:
sara04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
101540728 (FGD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
FYVE_2
FAM176
CENP-B_dimeris
Myc_N
RHG20_PH
PH_2
Motif
Other DBs
NCBI-GeneID:
101540728
NCBI-ProteinID:
XP_004606635
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MQGHRAPGGAGPSEPEPPGGSSPGAALRACADSDPGTPEPGLPVPRGSGSALSGPADPQF
VGPADACSGASPGPRLLFCGPSSQHHRTLRFSYHLEGSQPRLGLHQGNRILVKSLSLDPG
QSIEPHPEGPQRLRSDPGPPTETPSQRPSPLKRAPGPKPQVPPKPSYLQMPRMSPAPEPI
PPPPSRPLPADPRVTKGLAPRAEVSPSSAAVSSLIEKFEREPVIVALDRPAPGPSPGSTE
PAMLPQPPLQPPVPQLPEGEASRCLFLLAPGPRDGEKVPNRDSGIDSISSPSNSEETCFV
SDDGPPSHSLCPGPPALASAPVALADPHRPSSQEVDSDLEEEDDEEEEEEEEEEEKDREI
SVPLMERQESVELTVQQKVFHIANELLQTEKAYVSRLHLLDQVFCARLLEEARNRSSFPA
DVVHGIFSNICSIYCFHQQFLLPELEKRMEEWDRYPRIGDILQKLAPFLKMYGEYVKNFD
RAVELVNTWTERSTQFKVIIHEVQKEEACGNLTLQHHMLEPVQRIPRYELLLKDYLLKLP
HGSPDSKDAQKSLELIATAAEHSNAAIRKMERMHKLLKVYELLGGEEDIVSPTKELIKEG
HILKLSAKNGTTQDRYLILFNDRLLYCVPRLRLLGQKFSVRARIDVDGMELKESSNLNLP
RTFLVSGKQRSLELQARTEEEKKDWVQAINSTLLKHEQTLETFKLLNSTNREDEDTPPNS
PNVDLGKRAPTPIREKEVTMCMRCQEPFNSITKRRHHCKACGHVVCGKCSEFRARLIYDN
NRSNRVCTDCYIALHGVSGSSPACSQHTPQRRRSILEKQASVAAENSVICSFLHYMEKGG
KGWHKAWFVVPENEPLVLYIYGAPQDVKAQRSLPLIGFEVGPPEAGERPDRRHVFKITQS
HLSWYFSPETEELQRRWMAVLGRAGRGDTFCPGPTLSEDREMEEASVAASGATVEPPDVP
RTRDKI
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgcagggccaccgtgccccggggggcgctgggccttcggagcctgaacccccgggaggc
agcagcccaggcgccgctctacgggcctgtgccgactcggaccctggaaccccggagccc
ggactgccggtgcccaggggctcaggttcggctctcagcggcccggcagatcctcagttt
gtcggacccgcggacgcctgctcgggcgcttctccggggccccggctcttgttctgcggt
cccagttcccagcaccaccggaccctgcgcttctcctaccacctggagggctcgcagccc
cggcttgggttgcaccagggaaaccggattctggttaaaagtttgtccttggaccctggt
cagagcattgagcctcatccagaaggtccccagcgccttcgctctgacccaggacctccc
actgagacccctagccagcgtccttcaccattgaagcgggcgccaggcccgaagccacag
gtgcccccaaagcccagctacctgcagatgccccggatgtcccctgcacctgagcctatc
ccccctccaccatcacgcccattgcctgcagatccccgagtgaccaagggtctggccccc
agagcagaggtcagccccagttctgcagcagtatcctcactgattgagaaatttgaaaga
gaacctgtgattgttgccttggataggccagcccctggacccagcccaggttccacagaa
ccagccatgttgccacaaccacctctacaaccaccagtgccccagctccccgagggtgag
gcctcccgctgcctattcctgttggctcctgggccacgggatggtgagaaggtgcccaac
cgggacagcggcattgacagcatcagctcgccatccaacagtgaggagacctgctttgtc
agtgatgacgggccccccagccacagcctctgccctgggccccctgccctggccagtgcc
cctgttgctttagccgatccccaccggcccagctcccaggaggttgatagtgacctggag
gaagaggacgatgaggaggaggaggaggaggaggaggaggaggagaaggacagagaaatc
tcagtgcctctgatggagagacaggagtctgtggagttgaccgtgcaacagaaggtgttc
cacattgccaatgaactcctgcaaactgagaaggcctatgtttctaggctccatctcctg
gatcaggtattttgtgcccggctactggaagaagctcgaaaccgcagttccttcccagct
gatgttgtccatggcatcttctctaacatctgctccatctattgcttccaccagcaattc
ctattgcctgagctagagaagcgcatggaagaatgggaccgctacccacgcattggagac
atcttgcagaagctggcaccctttctcaagatgtatggcgagtatgtgaagaactttgac
cgggctgtggagctggtgaatacctggacagagcgctccacacagtttaaagtgattatc
catgaggttcagaaggaggaagcctgtggcaacctgacattgcagcaccacatgctggaa
cctgtgcagcgcatcccccgctatgagctgcttctcaaggattatctgttaaagttaccc
catggctctccagacagcaaggatgctcaaaagtctctggagctgatagccacagcagca
gaacactctaacgctgccatccgcaaaatggaacggatgcacaagctgctgaaagtgtat
gagctattagggggtgaggaagacattgttagccctaccaaagagctcataaaagaaggc
catatccttaagctgtcagccaagaatgggaccactcaagaccgatacctcatactattc
aacgaccgcctcctttactgcgtgcccaggctgcggctccttggccagaagtttagcgtg
cgggcacgcattgatgtagatggtatggagctaaaggaaagctccaacctcaatctgcct
cggaccttcctggtgtcaggaaaacagcgctccctggagctccaggccaggactgaggaa
gagaagaaagactgggtccaggcaatcaactctaccctcctaaagcatgaacagacacta
gaaacattcaaactgttgaactcaactaacagagaagatgaagatacaccccctaattct
ccaaatgtggatcttggaaagcgggcacctacacccatacgagaaaaggaagtcaccatg
tgcatgcgctgccaggagccattcaattccatcaccaaacgcaggcaccactgcaaagcc
tgtgggcatgtagtttgtggaaagtgctctgagttccgtgcccgcctcatctatgacaac
aaccgttctaaccgtgtgtgtactgactgctacatagcactgcatggggtatctgggagc
agtccagcctgtagtcagcatacaccccaaagacggaggtccattctggagaaacaggcc
tcagtagctgcggagaacagcgtcatctgcagcttcctgcactacatggagaagggcggg
aaaggctggcacaaggcctggtttgtggtccctgagaatgaacccttggtgctgtacatc
tatggggcccctcaggatgtgaaagctcagcgcagcctgcccctcatcggctttgaagtg
gggcctcctgaggcaggagagcggcctgacagaaggcatgtcttcaagatcacccagagc
catttaagctggtacttcagtcctgagacagaagagctgcagcggcgctggatggcagtg
ttgggccgggcaggccgtggagatacgttctgcccagggcccacactgtctgaggacagg
gaaatggaggaggcatcagtggcagcttcaggagccactgttgaaccccctgatgtcccc
cgaacccgagataaaatctaa
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