Sorex araneus (European shrew): 101540808
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Entry
101540808 CDS
T07854
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04151
PI3K-Akt signaling pathway
sara04382
Cornified envelope formation
sara04510
Focal adhesion
sara04512
ECM-receptor interaction
sara04820
Cytoskeleton in muscle cells
sara04926
Relaxin signaling pathway
sara04933
AGE-RAGE signaling pathway in diabetic complications
sara04974
Protein digestion and absorption
sara05146
Amoebiasis
sara05165
Human papillomavirus infection
sara05200
Pathways in cancer
sara05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101540808 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101540808 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101540808 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101540808 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
101540808 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
101540808 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
101540808 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101540808 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
101540808 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101540808 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
101540808 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101540808 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sara04147
]
101540808 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
sara00536
]
101540808 (COL4A5)
Exosome [BR:
sara04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101540808 (COL4A5)
Glycosaminoglycan binding proteins [BR:
sara00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101540808 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101540808
NCBI-ProteinID:
XP_012787671
LinkDB
All DBs
Position
Unknown
AA seq
1671 aa
AA seq
DB search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NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccctatggctactaggtcttcagcaggtctggcttgctatgggtgttctgca
ggatcaaagtgtgactgtcgtggtgtaaaaggagaaaagggggagaaaggacttccagga
ttggaaggccatccaggtttgcctggatttccaggtcctgaaggtcctccagggcctctg
ggacaaaagggtgatgatggaattccaggaccaccaggaccaaaaggcattagaggtcct
cctggacttcctggatttccagggacaccaggccttcctggaatgccaggccatgatgga
gctccaggacctcaaggtatccctggttgcaatggaaccaagggagaacgtggatttcca
ggcagtcccggttttcctggtgtacagggtcctccaggacctcctggtatcccaggcatg
aagggagaaccaggtagtgtaatcatgtcatcactaccaggaccaaagggtaatacagga
tatccaggtcctcctggagtacaaggtccggctggtcccactggtataccaggaccaatg
ggtcctccaggaccgccaggtttaatgggtcctcctggtccaccaggacttcctggacca
aagggcaatatgggcttaaatttccagggacccaaaggtgaaaagggtgaacaaggtcct
caagggccccctggaccacctgggcagatcgatgaacagaaaaggccaattgatctagag
tttcagaaaggagatcagggactacccggtgagcaagggccccctggacctccgggaata
cgtggtcctccaggccctccagggggtgtgaagggtgagaaaggtgaacaaggagaacca
ggcaaaagaggcaaaccaggaaaagatggagagagtggccagccaggaattccaggtttg
ccaggtgatcctggttaccctggtgaaccaggaagaaatggagaaaagggccagaaaggt
gacattggtccaactggacctcctggacttgtaattcccagacctggaacaggtgtaaat
gtaggagaaaaaggaagcattgggttacctggcttgcctggagaaaaaggagaaaaggga
tttcctggtatacagggtccacctggtctgcctgggcctccaggagttgcagctataggt
ccgcctggccctcctggcttgcctggagaaaagggccagaaaggtgatgaaggtctacct
ggaatttctattcctggatctcctggacttgatggacagcctggaacgcctggccttccc
ggtcctcctggtcctcctggccctcctgcccctcctggtgatgagatttgtcaatcaggc
ccacctggtcctcaaggccctccaggtgataaaggactccgaggagaacaaggagtgaaa
ggtgaccaaggtgacacttgcttcaactgtattggaactggtatttctgggcttcctggt
cagcctggtttgccaggtctcccaggtcctccaggatctcttgggttccctggaccaaaa
ggtgaaaaggggcaagctggtacaactggtcccaaaggactaacaggaataccaggggct
ccaggggctccaggctttcctggatctaaaggtgaacctggtgacatctacacttaccca
ggaatgaagggtgacaaaggagagttgggtccccctggatctccaggacttcctggttta
cctgggactcctggacaggatggattgccaggacttcctggccgcaaaggagaacctggt
caaattgcttttaagggtgaaagaggtccccctgggaaccccggcttgccaggtccccca
gggaacatggggcctatgggccctgttggcattgggcctccaggcccagtaggtgaaaaa
ggcataaaaggtatgacaggaagtccaggtcagccaggaattccaggtccgaagggtgat
ccaggtcagaccataactcagccaggaaagcctggcctacctggtagcccaggtagagat
ggtgaagtaggtcttccaggtgaacctggactcccaggccaaccaggcttgccaggatta
cctggcagcaaaggagaaccaggcatgcctggaattggactgcctggacctccaggcccc
aaaggttatcctggaattccagggcccccaggagtacctgggatacctggaagaagtgga
gtagaaggtcctcctgggctaccaggcatcccaggtccaaagggagaaccaggatttgct
ctacctggacctccaggacctccaggactcccaggcatcaaaggaacacttggcccaaaa
ggggaccgaggtttcccaggccctccaggtcctccaggacaaactggcatggatggaatg
cccggatcgaaaggtgacattggagcaaatggacaacctggaccaattggacctcctggg
ctgccaggaataggtgttcagggaccaccaggaccaccagggattcctggaccaccaggg
cagcctggcttaaaaggaataccaggagagaagggggattcaggaccccctggatttgat
gttccgggtccccctggtgagaaaggcagtccagggatccctggagcacctggtcctgtg
ggacctccaggatcaccagggctcccaggcaaagcaggtgccactggttttccaggtgcc
aaaggtgaaatgggtattatgggaccgccaggcccaccaggacctttgggacttccagga
aggagtggtgttcctggtcttaaaggtgatgatggctttccgggtcaaccaggacttcct
ggccctgcaggagaaaaaggtagtaaaggagagcctggccttccaggtcctccaggacca
atggatccagatgcaatagtctcaaaaggagagaagggggatcctggtttacctggattt
cctggagtttctgggccaaaaggtcatcccggtttacctggagacccaggacaacctgga
ttaagtggggagcctggattaccaggaccctcaggtcctaagggtgaacctggtgtccca
gggcatccaggacatatgggacctcctggacttaaaggaaacatgggtgatatggggttt
ccaggacctcagggtctgaaaggatcatctggacctcctggcattcctggacaacctggc
tccccaggactcacaggacagaaaggagaaaaaggtgatccaggtgcttctggcactcgt
cttccaggtctgcctggcccaaagggtgaacctggtctgcctggatacccaggtaaccct
ggtatgaaaggttctgcaggagctactggtttgcctggagcaaaaggagaacctggagca
aaagggcaaccaggccttcctggagtcccaggaaccccaggccttcctggaccgaagggt
attaatggtcctcctggggatcctggccttcctggagaacctggtcctgtaggtgggaga
ggtcatcctgggcagccagggcctgtaggtgaaaaaggccttcctggtcaagatggtatt
cctgggccagctggacagaaaggtgaaccaggtcaaccaggatttggaatcccaggacca
cctggacttccaggactctctggtcaaaagggtgatggaggattacctggcatacctgga
aatcctggccttccaggcccaaagggtgaaccaggctttcatggtttccctggtttacaa
ggtcccccaggccctcctggttctccaggtccagctctggaaggcccaaaaggcagtccg
ggtccccaaggtcatcctgggagaccaggtcaaccaggtccagaaggtcctcgtggtctc
cctggaaatggaggtattaagggagagaaaggaaacccaggccaacctgggcaacctggt
ttgcctggcttgaaaggagatcaaggaccaccaggactccagggtgatcctggtcatcca
ggtctcattggaatgaaaggagatccaggtcttcctggtgttccaggattcccaggcatg
aaaggacccactggagtacctggtacaactggccctgaaggaaatcctggacttatgggg
cctcctggtccccctggattacctggtccttccggacaaagtattattatcaaaggagac
actggtccacctggagtcccaggccaacctggattaaaaggtccaccaggcccaccagga
cctcaaggattaccaggtccaattggccttcctggagaccctggacgcaatgggctccct
ggatttgatggagcaggaggacgcaaaggagaccagggtctgcctggccaaccaggtgcc
cgtggtttggatggtcctcctgggccagatggactacaaggccccccaggtccacctgga
tcctcctttttcacccatggattcctcatcacacgtcacagtcagacaacagatgcacct
ccatgcccaccaggaactgtcaagatttatgaaggcttttcgcttctgtatgtacaagga
aataaaagagctcatggtcaagatttggggacggctggcagctgccttcgtcgcttcagt
accatgcccttcatgttctgcaatgttaataatatttgcaattttgcttcaagaaatgac
tattcttactggctctccaccccagagccaataccaatgaacatggagcccttgaaaggc
cagaacattaagccatttattagtcgatgtgcagtatgtgaagctccagccatggtcatt
gcagttcatagtcagaccgtccaaattccccattgtccacaggaatgggattctctctgg
attggttattccttcatgatgcactcaagttcaggagcagagggttcaggtcaagctctg
gcctcccctggctcttgcttggaagagtttcgttcggctcccttcattgaatgtcatggg
cgaggtacctgcaactactatgccaactcctacagtttttggttggcaaccgtggatatt
tcagacatgtttagcaagcctcagtcagaaacattgaaagcaggagacttgagaactcgc
attagccgatgtcaagtgtgtatgaaaaagacataa
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