Sorex araneus (European shrew): 101540832
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Entry
101540832 CDS
T07854
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sara03041
]
101540832 (RBM39)
Spliceosome [BR:
sara03041
]
Common components
Common spliceosomal components
General mRNP proteins
101540832 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
101540832
NCBI-ProteinID:
XP_004612574
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgtaaaagaagcaaaagtaaggaacggaagcgaagtcgagat
agagaacggaaaaagagtaaaagtcgtgaaaggaagagaagtagaagtaaagaaagaaga
cgaagtcgttcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaagacgttctcgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
ccaattgataatttaactcctgaggaaagagatgcaaggacagttttctgcatgcagttg
gcagctagaattcggccacgggatttggaagagtttttctctacagtaggaaaggttcga
gatgtgaggatgatttctgacagaaattcaagacgttctaaaggaattgcttatgtggaa
tttgttgacgttagctctgttcctctagctataggattaactggccagcgtgttttagga
gtgcccatcatagtacaggcatcccaggccgaaaaaaacagagctgcagcaatggcaaac
aatctacaaaagggaagtgctggacctatgaggctttatgtgggctccttacattttaac
ataaccgaggatatgctcaggggaatctttgagccttttggaaggattgaaagcatccag
ctcatgatggatagtgaaacaggacgatccaaggggtatggatttatcacgttttctgat
tcagaatgtgccaagaaggctttggaacaacttaatggatttgagttagcaggaagacca
atgaaagttggccatgttactgaacgaactgatgcttccagtgctagctcatttttggac
agtgatgaactggaaaggactggaattgatttgggaacaaccggtcgcctacaattaatg
gcaaggcttgcagaaggtacaggtttgcaaattccaccagcagcacagcaagctctacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttctcaacagacggaagcttcagctttagctgcagctgcttctgttcagcca
cttgcaacacaatgctttcaactctctaacatgtttaaccctcaaacagaagaagaagtc
ggatgggataccgagattaaagatgatgttatcgaagaatgtaataaacatggtggagtt
attcatatttatgttgataaaaattcagctcagggcaatgtgtatgtgaagtgcccatcc
attgctgcagccattgctgcagtaaatgcattgcatggcaggtggtttgctggaaaaatg
ataacagcagcgtatgtacctcttccaacttatcacaacctcttccctgattctatgaca
gcgacacaactactggttccaagtagacgatga
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