KEGG   Sorex araneus (European shrew): 101540883
Entry
101540883         CDS       T07854                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
sara  Sorex araneus (European shrew)
Pathway
sara03030  DNA replication
sara03410  Base excision repair
sara03420  Nucleotide excision repair
sara03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sara00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101540883 (RFC4)
   03410 Base excision repair
    101540883 (RFC4)
   03420 Nucleotide excision repair
    101540883 (RFC4)
   03430 Mismatch repair
    101540883 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sara03032]
    101540883 (RFC4)
   03036 Chromosome and associated proteins [BR:sara03036]
    101540883 (RFC4)
   03400 DNA repair and recombination proteins [BR:sara03400]
    101540883 (RFC4)
DNA replication proteins [BR:sara03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101540883 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    101540883 (RFC4)
Chromosome and associated proteins [BR:sara03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101540883 (RFC4)
DNA repair and recombination proteins [BR:sara03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101540883 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    101540883 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_assoc_2 DUF815 AAA_16 AAA_22 AAA_11 AAA_30 AAA_24 Mg_chelatase DNA_pol3_delta AAA_28 RuvB_N SLFN-g3_helicase AAA_5 AAA_19 ResIII Viral_helicase1 AAA_7
Other DBs
NCBI-GeneID: 101540883
NCBI-ProteinID: XP_004603309
LinkDB
Position
Unknown
AA seq 365 aa
MQAFLKGASISTKPPATKDRGIAAAAGSSGENKKVKPVPWVEKYRPKCVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVSGSRTDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIADREHVKISNEGITYLVKVSEGDLRK
AITFLQSATRLTGGKEVTEKVITDIAGVIPADTIDVLFTVCQSGSFDKLEAVVKDLINEG
HAATQLVNQLHDAVVEKDDLSDKQKSVITEKLAEVDKCLADGADEHLQLISLCATVMQQL
TQNVK
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgcaggcatttctaaaaggtgcctctatcagcactaagccaccagcaaccaaggaccga
ggcatcgctgccgctgcagggagcagtggagagaacaagaaggttaaacctgttccctgg
gtggagaaatatcgcccaaaatgtgtggatgaagttgctttccaggaagaagtagttgca
gtgctgaaaaaatctttagaaggagctgatcttcctaatcttttattttatgggccacct
ggaactggaaaaacatccacaattttggcagctgctagggaactctttgggcctgagctt
tttcgattaagagttcttgagttaaatgcgtctgatgaacgtggaatacaagtagttaga
gagaaagtgaagaattttgctcagttaacggtgtcaggaagccgtacagatgggaagcca
tgtcctccttttaaaattgtgattctggatgaagcggattccatgacctcggctgctcaa
gcagctttaagacgaaccatggagaaagagtctaaaaccacacgattctgtctcatctgt
aactatgtcagtcgaataattgaacccttgacctctagatgctctaaatttcgcttcaaa
cctctctcagataaaattcaacagcagcgattactagacattgctgatagagaacatgtc
aaaattagcaacgagggaataacctatcttgttaaagtatcagaaggagacttaagaaag
gccattacatttcttcaaagtgctactcgtttaacaggtgggaaagaggttacagagaaa
gtgatcacagacattgctggggtaataccggcagacactattgatgttctatttactgtg
tgtcagagcggctcttttgacaaactagaagccgtggtaaaggatttaataaatgaggga
catgcagcaactcagctggtaaatcaacttcatgatgctgttgtagaaaaagatgatctt
tctgataagcagaagtcagttataactgaaaagcttgctgaggtggataagtgcttagca
gatggtgctgatgaacacttgcaactgatcagcctctgtgctactgtgatgcaacagctg
acccaaaatgttaaatga

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