Sorex araneus (European shrew): 101541117
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Entry
101541117 CDS
T07854
Symbol
SMARCAD1
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101541117 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sara03036
]
101541117 (SMARCAD1)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101541117 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
ERCC3_RAD25_C
CUE
Pyr_excise
Motif
Other DBs
NCBI-GeneID:
101541117
NCBI-ProteinID:
XP_012790303
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MSLFNLDRFRFEKRNKLEGAPEAAPLAAPPGPSSPISLSAEEENEEGSRPGTPDSDVTEK
TEDSSVPETPENERKASVSYFRSQKGIQYIDLSSDTEEAASPNCSSALQEKAPGRDTVII
VSEPSEDEGSPGPPAVAGGSEGDISELDDIKDAKLQTLKELFPQRSDADLLKLIESTSTM
DGAIAAALLMFGDAEGGGPRKRKLSSSPERYVEDDFSDEQSLKKKKLDHEEESSGAAEPS
GSWEEQESIVLKLQKEFPNFDKQELRDVLREHEWMYTEALESLKVFAEDQDTQYSSRGDF
PNGKEVSSRSQSFPKTATKKLKQKCALKPQNGFSKKRKKHVCNPKRALEDSEYDSGSDAG
SSLDQDYSSGEEVVGDGYQGKILHFLQDASVGELTLIPQCSQKKAQKITELRPFNSWEAL
LVWGVFLEVSPWAFVLGAGSREAAVGGRLSLKPYQKVGLNWLALVHKHGLNGILADEMGL
GKTIQAIAFLAYLYQEGNKGPHLIVVPASTIDNWLREVQLWCPALKVLCYYGSQEERKQI
RYNIHSKYEEYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMT
INRTYSFFTXKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMS
EKQEQLYLSLFNRMKKSINNLERNTEMCNVMMQLRKMANHPLLHRQYYTPEKLRDMAQLM
LKEPTHREANPDLIFEDMEVMTDFELNVLCKQYRHINNFQLDMDLILDSGKFRVLGCILS
ELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFV
FLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIE
ESMLKINQQKLKLEQDMTTADEGDEGSVPADIATLLRTSMGL
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcttcaacctcgaccgcttccgcttcgagaaacggaataagctcgagggtgcc
cccgaggccgcccccctggccgccccgccgggcccctcgtcgcccatttccctcagtgcc
gaggaggagaacgaggaggggagccggcccgggacccccgactccgacgtcactgagaaa
acagaagattcgagtgttccggaaactcccgagaatgagcggaaagccagcgtctcctac
ttcaggagccagaagggaatccagtacatcgacctgtcctcggacacggaggaggccgcg
tccccaaactgctccagcgccctgcaggagaaggcgcccggcagagacaccgtgatcatc
gtctcggaaccgtcagaggatgaggggtccccagggcccccggctgtggcaggaggcagc
gagggtgacatctcagagctggacgacatcaaggacgcgaagctgcagaccctgaaggag
ctcttcccgcagaggagcgacgccgacctgctcaagctgattgagtccacgagcaccatg
gacggagccatcgccgccgccttgctgatgttcggggacgcagagggcggcgggcccagg
aagcggaagttatcttcctctcccgagcggtatgtggaagacgacttcagcgacgagcag
tccctgaagaagaagaagctggaccatgaggaggagtccagcggggctgcggagccgagc
ggcagctgggaggagcaggaaagtatcgtactgaaactgcagaaggaatttcccaatttc
gacaagcaggagctgagggacgtgctcagggagcatgagtggatgtacaccgaagccttg
gagtccctgaaagtgttcgcagaagaccaagacacgcagtattcctcgcggggcgacttt
cccaacgggaaggaagtttcctcgaggagtcagagtttccccaagactgcgactaagaaa
ctgaagcagaaatgtgccctgaagccccagaacggcttcagcaagaaacgtaaaaaacac
gtgtgcaacccgaagcgggccctggaggactccgagtacgactcgggctcggacgcgggc
agctcgctggaccaggactacagcagcggggaggaggtggtgggcgacggctaccagggc
aagatcctgcacttcctccaggacgcctcagtcggcgagctcaccctcatcccccagtgc
tcgcagaagaaggcccagaagatcacggaactccggccctttaacagctgggaagctctg
ctcgtctggggtgttttcctggaggtgagcccctgggcctttgtcctgggagccgggagc
cgggaggccgcggtcgggggacgcctgtcgctcaagccctaccagaaggtcgggctgaac
tggttggccctggtgcacaagcacgggctgaacggcatcttggcagacgagatgggccta
ggaaaaactattcaagccattgcattcctggcatacctataccaagagggtaataaaggg
cctcatttgatcgtagtgccggcctcaactatagataactggctccgggaggtgcagctg
tggtgcccggcactgaaggtgctctgttactacggttcccaggaggagcgcaagcagatc
cggtacaacatacacagtaaatacgaggagtacaacgtgatcgtgaccacgtacaactgt
gccatcagcagctccgacgaccgcagtctgttccgaaggctgaagctcaattacgccatc
ttcgacgagggccacatgctgaaaaacatgggctccatccgttaccagcatctcatgacg
attaacagaacatattctttctttacttagaaatccgcagacgagcaaagtatatacgag
aaggagagaatagcgcatgcaaagcaaataataaagccatttattctcaggagagtaaag
gaagaggttctcaagcagctgcccccaaagaaagatcgcattgagctgtgtgccatgtcc
gagaagcaggagcagctgtacctgagtcttttcaacaggatgaagaagtctatcaacaac
ctggagaggaacacggagatgtgcaacgtcatgatgcagctgcggaagatggccaaccac
ccgctgctgcaccgccagtactacacgcccgagaagctccgggacatggcccagctcatg
ctgaaggaaccgacgcatcgtgaggccaaccctgacctgatttttgaagatatggaagtt
atgacggactttgaattaaacgtactttgtaaacagtatcgacacattaataacttccag
ttagacatggatttgatcttagattctgggaagtttcgagttctaggatgcatcttgtct
gaactgaaacagaagggcgacagagtcgtcctgttcagccagttcaccatgatgctggac
atcctggaggtcctcctgaagcaccaccagcacaggtacctgaggctggacgggaagacc
cagatctcagagagaattcatctgatcgatgagtttaacaccgacatggatatctttgtg
ttcctgctgtcaacaaaagctgggggcctgggaatcaacctgacgtccgccaacgtcgtc
attctgcacgacatcgactgcaacccgtacaacgacaagcaggcagaggaccggtgccac
agggtcggccagaccaaagaagtgctggtcatcaagctcataagccaagggacgattgag
gagtccatgctcaagatcaaccagcagaagctgaagctggagcaggacatgacgaccgct
gacgaaggggacgagggcagcgtgcccgccgacatcgccacactgctcaggacgtccatg
ggcctgtga
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