Sorex araneus (European shrew): 101541198 Help Entry 101541198         CDS       T07854                                  Symbol ATG4D Name (RefSeq) cysteine protease ATG4D   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism sara  Sorex araneus (European shrew) Pathway sara04136   Autophagy - other sara04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:sara00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     101541198 (ATG4D)    04136 Autophagy - other     101541198 (ATG4D)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:sara01002]     101541198 (ATG4D)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sara04131]     101541198 (ATG4D)    03029 Mitochondrial biogenesis [BR:sara03029]     101541198 (ATG4D) Peptidases and inhibitors [BR:sara01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    101541198 (ATG4D) Membrane trafficking [BR:sara04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     101541198 (ATG4D) Mitochondrial biogenesis [BR:sara03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     101541198 (ATG4D) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 YIEGIA_cap Motif Other DBs NCBI-GeneID:  101541198 NCBI-ProteinID:  XP_004616621 LinkDB All DBs Position Unknown AA seq 324 aa AA seqDB search MLRSGQMMLAQGLLLHFLPRDWTWPEGAGLVPPEPSALASPLRYRARWVPPRWPQGAPEL EQERRHRQIVSWFADHPQAPFGLHRLVDLGHSSGKKAGDWYGPSLVAHILRKAVESSPEV ARLAVYVSQDCTVYKADVARLVARPDPAAEWKAVVILVPVRLGGETLNPVYVPCVKELLR SELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQPAVDFSQADFPLESYHCTAPRKMAF SKMDPSCTVGFYAGDRKEFEKLCSELTRVLSCSSVSERYPMFTLAEGHAQDHSLDDLGCQ STPRLPRPGRPKAKRPSSEDFVFL NT seq 975 nt NT seq  +upstreamnt  +downstreamnt atgctgcgcagtgggcagatgatgctggcccagggcctgctgctgcacttcctgcccaga gactggacgtggcccgagggcgcaggcctggtcccccctgagccgtccgcactggcctct ccactccggtaccgcgcccgctgggtgcccccgcgctggccccagggtgcccccgagctg gaacaggagcgccggcaccggcagatcgtgtcgtggttcgctgaccacccccaggccccc ttcggcctccaccggttggtggacctggggcacagctcaggcaagaaggcgggagactgg tacgggccgtcgctggtggcacacatactcaggaaagctgtggagagcagccccgaggtg gcccgcctggcagtgtacgtctctcaggactgcacagtatacaaggcagacgtggcacgc ctggtggccaggccggaccctgcggccgagtggaaggcggtggtcatcctggtgcctgtg cggctgggtggcgagaccctcaacccggtgtatgtgccctgcgtgaaggagctgctgcgc tcggagctatgcctgggcatcatggggggcaaaccacgccactcactctacttcatcggc taccaggatgacttcctgctctacctggacccccactactgccagcctgctgtggacttc agccaggctgatttccccctggagtcctaccactgcaccgcaccccgcaagatggccttc tccaagatggaccccagctgcactgtggggttctacgctggagaccggaaggagtttgag aagctctgctccgagctgaccagggttctcagctgctcctcggtgtccgagcgctacccc atgttcacgctggccgagggccacgctcaggaccacagcctggacgacctcggctgtcag tctacaccgcggctgccaaggccaggccggcccaaggccaagcgccccagctctgaggac tttgtgtttttatga

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