Sorex araneus (European shrew): 101541291
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Entry
101541291 CDS
T07854
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
sara
Sorex araneus (European shrew)
Pathway
sara01524
Platinum drug resistance
sara03430
Mismatch repair
sara05200
Pathways in cancer
sara05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101541291 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101541291 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
101541291 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
101541291 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sara03400
]
101541291 (MSH2)
DNA repair and recombination proteins [BR:
sara03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101541291 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
101541291
NCBI-ProteinID:
XP_004618654
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MAVQPKDTLQLEGAAELGFVRFFQSMAEKPATTVRLFDRGDFYTAHGEDALLAAREVFRT
QGVLKYLGPAGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVFKNRAGNKASKENDWYLA
YKASPGNLSQFEDILFGNNDPSAAIGVVGVKMSSVDGQRQVGIGYVDALDRKLGLCEFSD
NDQFSNLEALLIQIGPKECVLPSGEAAGELGKLRQVIQRSGILITERKRTDFSTKDIYQD
LNRLLKGKKGEQVNSAVLPEMENQVAVSSLSAVVKFLELLSDDSNFGQFELTTFDFGQYM
KLDIAAVRALNLFQGSVEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKSRIEERL
DLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIRV
LEKYEGKHQTLLLAVFVTPLSDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLERKMQSTLVSAARELGLDPGKQIKLDSSAQLGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEDAQDAIVKEIVNISSGYVEPMQIFNDVLA
QLDAVVSFAHVSNGAPVPYVRPMILEKGQGRVTLKASRHACVEVQDDVAFIPNDVEFDKE
KQTFHIITGPNMGGKSTYIRQTGLIVLMAQIGCFVPCAFAEVSIMDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALASQVPTVSNLHVTALTSEETLIMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGEPQYDDLEPAAKRCYLEREQGEKIIQEFLYKVKQVPFTEMSE
ENIMKRLRQLKAEVVAQNNSFVNELIKRIKVTS
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcagcccaaggacacgctgcagctggagggcgcggccgagctgggcttcgtg
cgcttcttccagagcatggccgagaagcccgccaccacggtgcgcctgttcgaccgcggc
gacttctacacggcgcacggcgaggacgcgctgctggccgcccgcgaggtgttcaggacg
cagggcgtgctcaagtacctgggcccggcaggagcaaagacgctggagagtgttgtgctg
agtaagatgaactttgagtcttttgtgaaggatctgcttctggttcgtcagtatagagtt
gaagtgttcaagaatagagctggaaataaggcatccaaagagaatgattggtatttggcg
tataaggcgtcccccgggaacctttctcagtttgaagacatcctgtttgggaacaacgac
ccatcggcagccatcggcgtggtgggtgtgaagatgtcctctgtggatgggcagcggcag
gtggggatcggctatgtggatgccctggacaggaagctcggtctgtgcgagttctcggat
aacgaccagttctccaacctggaggcactgctgattcagattgggcccaaggagtgcgtc
ctcccctcgggagaggcggctggcgagctgggcaaactgcggcaggttattcagagaagc
ggaattctgatcacagagagaaaaagaactgacttttccacaaaagacatttaccaggac
cttaaccggctgttgaaaggcaagaaaggagagcaggtgaatagtgctgtcctgccggaa
atggagaatcaggttgcagtttcatcattgtctgcagttgtcaagtttttggaactccta
tcagatgactcaaacttcgggcagtttgaactgaccacttttgactttggccagtatatg
aaattggacattgcagcagtcagagcccttaaccttttccagggttctgttgaagatact
tcagggtctcagtccctggccgcgttgctgaataaatgcaaaacccctcaaggacagaga
ctggttaaccagtggatcaagcagcctctcatggacaagagcagaatagaggagaggttg
gatctggtggaagcttttgtggaagatgcagaactgaggcagagcctgcaggaagattta
cttcgaagattcccagatcttaaccgacttgctaagaaatttcaaaggcaagcagcaaat
ttgcaggattgctacagactgtatcagggcataaaccagctcccgaatgttatccgagtt
ctggagaaatacgaaggcaaacaccagacattgttgttggctgtttttgtgacccctctg
agtgatcttcgttctgatttctccaaattccaggaaatgatagaaacaacgttagatatg
gatcaggtggaaaaccatgaattccttgtgaaaccttcatttgatcctaatctgagcgag
ttaagagaaataatggatgacttggaaaggaagatgcagtccacattagtaagtgcagct
cgagagctaggcctggatcctggcaaacagattaaactggattccagtgcccagttagga
tattattttcgtgtaacctgtaaggaagaaaaagttcttcgtaacaataaaaacttcagt
actgtagatatccagaagaatggtgttaaatttactaacagtaaattgacctctctcaat
gaagagtatacaaaaaataaaaccgagtatgaggacgcccaggatgcaatcgttaaagaa
attgtcaatatttcttcaggctatgtggaaccaatgcagatcttcaatgacgtgctggca
cagctcgatgcagttgtcagcttcgcccacgtgtctaatggagcgcccgtcccctacgtc
cggcccatgattttggagaagggacagggcagggtgacactgaaagcgtccagacacgct
tgtgttgaagtgcaagatgacgtcgccttcattcctaatgacgttgagtttgacaaagag
aaacagacgttccacatcatcacaggccccaacatgggaggcaagtccacatatattcgg
cagaccgggctgatcgtgctcatggcccagattggatgttttgtgccttgtgccttcgca
gaggtgtccatcatggactgcatcctggcccgggtgggggctggtgacagtcagctcaaa
ggagtgtccaccttcatggctgaaatgctggagactgcttccattctcaggtctgcaacc
aaagactctctgataatcatagacgagttgggaaggggaacctcgacctacgatggattc
gggcttgcctgggccatctccgagtacatcgcgaccaagatcggcgcattctgcatgttt
gcgacccacttccatgagctcacggccttggccagccaggtgcccacggtgagcaacctc
cacgtcacggcactcacctccgaggagacgctgatcatgctgtaccaggtgaagaaaggt
gtctgtgatcagagttttgggattcacgtggccgagctcgctaatttcccgaggcatgtg
atagagtgcgccaagcagaaggcccttgaacttgaggagtttcagaatatcggagaacca
cagtacgatgacctggaacccgcagcgaagagatgctacctggagagagagcaaggtgaa
aaaattatccaagagtttctatacaaggtgaagcaagtgccgtttactgagatgtcagaa
gaaaacatcatgaagaggctcagacagctgaaggctgaggtggtagcacagaataatagt
tttgtgaatgaactcatcaagcggataaaggtcacttcatga
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