Sorex araneus (European shrew): 101541355
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Entry
101541355 CDS
T07854
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sara03041
]
101541355 (PRPF39)
Spliceosome [BR:
sara03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101541355 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_12
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
101541355
NCBI-ProteinID:
XP_004612205
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MQNSHMDENRNSSNGSTDNSSEVVVEQSADFSTEIMNVTEMEQSPDGSPTENAATEESEM
ANAVELPVTETQANFPAEYEKFWKTIENNPQDFTGWVYLLQYVEQENHLMAARKAFDKFF
IHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDSGDP
ETNNTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSH
HFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKL
ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEF
EIENGTHERVVILFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKKPM
VHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAI
KNAKSNNESSFYAIKLARHLFKIQKNFPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL
KQNEENIINCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD
SLKRKAENGSEEPEEKKVHTEDTSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYGQY
YPPPPT
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgcagaattctcacatggatgaaaacagaaattctagtaatggcagcacagacaacagt
tcggaggtagtggtggaacagtctgctgacttcagtactgagataatgaatgttacagaa
atggaacagtcgcccgatggttctcccactgagaatgcagctacagaagaaagtgaaatg
gcaaatgctgtggaacttccagtgacagaaacacaagcaaatttccctgcagaatatgaa
aaattttggaaaaccatagaaaataatcctcaggattttacaggctgggtatatttgctt
cagtatgtagaacaggagaatcacttgatggctgccaggaaagcatttgacaaatttttc
attcactatccatattgctatggttactggaaaaagtatgcagaccttgaaaagcggcat
gacaacattaaacaatcagatgaggtgtatcggcggggacttcaggcaatacctcttagt
gttgacctttggatacattatataaacttcttaaaagaaactctggactctggtgatcct
gagacaaataatacaataagaggaacttttgagcacgcagttctagctgcaggaacagat
ttccgatccgacagactatgggaaatgtatataaactgggaaaatgaacagggaaacctg
agagaagttacagctatatatgatcgcatccttggtattccaacacagctgtatagtcat
cattttcagagatttaaagaacatgtacagaataacttgcctagagatcttttaactggt
gagcaatttattcagctacgaagagaattagcttctgtcaatggccatagtggtgatgat
ggtcctcctggtgatgatctgccatcagggattgaagatataactgatccagccaagcta
ataacagagatagaaaatatgagacatagaatcattgaaattcatcaggaaatgtttaat
tataatgaacatgaagttagtaaaaggtggacctttgaagaaggtattaaaagaccttat
tttcatgtgaaaccattggaaaaggcacaactaaaaaactggaaagaatacttagaattt
gaaattgaaaatggaactcatgaacgagtagtgattctctttgaaagatgtgtcatatca
tgtgctctctatgaggagttttggattaagtatgccaagtacatggaaaaccatagcatt
gaaggagtgaggcatgtcttcagcagagcctgtactattcatctcccaaagaaacccatg
gtgcatatgctgtgggcagcttttgaggagcagcagggtaatattaatgaggccagaaat
atcctgagaacatttgaagaatgtgttctaggattggcaatggttcgtttgagaagagta
agtttagaacgacggcatggaaatatggaagaagctgaacatttgcttcaggatgccatt
aagaatgccaaatcaaataatgagtcatcattttatgctatcaaactagctcgacatctt
tttaaaatacaaaagaattttccaaaatcaagaaaggtgcttttggaagcaattgaaaga
gacaaagagaacacaaagttatacctcaatttacttgaaatggaatatagtggtgacctc
aaacaaaatgaagaaaacatcattaattgttttgacaaagctatacatgggtcattacct
attaaaatgagaattacgttttctcaaagaaaagtggaatttcttgaagattttggttca
gatgttaataagcttctgaatgcttatgatgaacatcaaacactcctaaaagaacaggat
tctttaaaaaggaaagcagaaaatggctcagaagaaccagaggaaaagaaagtacacaca
gaagatacttcatcatctacacagatgattgatggtgatttacaggcaaatcaagctgca
tataattatagtgcctggtaccaatacaattaccagaacccttggaattatggacagtat
tatcccccccctccaacctga
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