Sorex araneus (European shrew): 101541706
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Entry
101541706 CDS
T07854
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101541706 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sara03041
]
101541706 (DDX46)
Enzymes [BR:
sara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101541706 (DDX46)
Spliceosome [BR:
sara03041
]
Complex A
U2 snRNP components
U2 related factors
101541706 (DDX46)
Complex B
101541706 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
101541706
NCBI-ProteinID:
XP_004610030
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MVASTFIENSWANRGKEELLKESGNRDRMGNEAGKYSTSKLNIIMENWQCSWGVRCALDA
LCWVKLCVSEALSLEENSGGLLNKRYSSRGERAQRGLPIVRFSSACSRAAGGMGRESRHY
RKRSASRGRSGSRSRSRSPSDKRSKRSDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRL
RRSRSKEKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQR
KKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEDPAEAEKEGNEMEGEELDPLDAYMEEV
KEEVKKFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEHT
SEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIM
SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKK
FSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVV
LDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRS
VVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCM
SLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRA
GRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTTVPPDLEKLWSDFKDQQKAEGKII
KKSSGFSGKGFKFDETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRV
KDMAAPGTSSVPAPTAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTIL
APTVSAKTIAEQLAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARW
KVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITR
LIKEELIRLQNSYQPTNKGRYKVL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggtggcttcaacatttattgaaaatagctgggctaatcgagggaaagaggaactgctt
aaagagtcggggaacagggatagaatgggaaacgaggctgggaagtacagcacttcgaag
ttgaacataatcatggagaactggcagtgctcttggggcgtgagatgtgccttggatgca
ctgtgttgggtgaaactatgtgtctctgaagccctcagccttgaggaaaattctggaggt
ttactcaacaagcgctactcctcccggggcgagcgggcgcagcgcggcctccccattgtc
cgcttctccagcgcgtgctcgcgtgcggccggcgggatgggccgggagtcacgccactac
cgtaagcgatcagcatctcgaggccgctctggaagtcggtctagaagtcgctcaccctca
gacaaaagaagtaaaagaagtgatgacagacgttctagaagcagagatagagaccgaagg
agagagcggtctcggagcagggataaaagaagatctcggtcaagggaccgaaaacgccta
agaagatctaggtccaaagaaaaaacagatagtggggaaagttctaaagagaagaaaaaa
gacaaagacgacaaggaggatgaaaaagaaaaagatgctggcaactttgaccagaataag
ctagaggaagagatgagaaagcgtaaagaaagagtagaaaaatggcgagaagagcaacgt
aaaaaggccatggaaaatatcggagaactgaaaaaggagattgaagaaatgaaacaaggg
aaaaaatggagtttagaagatgatgatgatgatgaagaagatcctgcagaagctgaaaag
gaaggaaatgaaatggagggtgaagaattagatcctttagatgcttacatggaagaagtc
aaagaagaagtaaaaaaatttaacatgagaagtgtaaaaggcggtgggggaaatgagaag
aagtctgggccgaccgtcacaaaagttgtcactgttgtgacgaccaaaaaggcagttgta
gattctgataagaagaaaggtgagctgatggagaatgatcaagatgccatggagcatact
tcagaggtgaacgtatttcggttggaaatggaaggcattacagtaaagggaaaaggttgt
cccaaaccaattaaatcttgggtccaatgtggaatttccatgaagattttaaattctctc
aaaaagcatggttatgaaaagcccacaccaatccaaacccaagcgattcctgctataatg
tctggaagggatttgattggtattgccaagacaggaagcgggaagaccattgcttttctt
ttgcctatgtttaggcacatcatggatcagaggtcattagaagaaggagaaggacctata
gctgtcatcatgactccaactcgagaactggctttacaaattactaaagaatgtaagaag
ttttcgaagactttgggacttcgcgtagtttgtgtttacggaggaacaggaattagtgaa
cagattgctgaactgaaaagaggtgctgaaattattgtttgtacacctggtcgaatgatt
gacatgttagcagctaacagtggtcgggtcacaaatcttcgaagagtgacatatgttgtt
ttagatgaagcagacagaatgtttgacatgggttttgaaccacaggttatgcgcattgtg
gataatgttcgtcctgatcgacagacagttatgttttctgctactttccccagagctatg
gaagcgttggctcgcagaatcctgagtaaacccattgaagtgcaggttggaggcaggagt
gtggtttgctcagatgtggaacaacaagtgattgtgatagaagaagaaaagaaatttctg
aaattacttgaacttctaggccattatcaagaatccggttctgtcattatatttgttgat
aagcaggaacatgctgatggtcttctgaaggatttaatgagagcttcttacccttgcatg
tctcttcatggaggcattgatcagtatgacagagatagcatcataaatgattttaagaat
gggacctgcaaacttcttgtagctacttctgttgctgctcgaggtctagatgtgaaacat
ctgattcttgtagtaaattatagctgtcccaaccactatgaggactatgtccacagagca
ggacggactggaagagcaggcaacaaaggttatgcatatacttttatcacagaagatcaa
gctcgatatgctggtgatataattaaagctcttgaattatcagggacaacagtgcctcct
gatctagagaaactttggagtgatttcaaagaccagcaaaaagctgaagggaaaataatc
aagaaaagtagtggtttctctggtaaaggattcaaatttgatgaaactgaacaagctttg
gctaatgagagaaagaagttacaaaaagcagctcttggtctgcaagattcagatgatgaa
gatgctgcagttgatattgatgagcagattgaaagcatgtttaattcaaagaagagagtg
aaggatatggctgctcctggaacatccagtgtccctgctccaactgctgggaatgcagag
aaattagaaattgctaaaagattggctcttagaatcaatgctcagaagaatttgggcatc
gagtctcaggatgtgatgcaacaggccaccaatgcgattctcagaggtggcaccattttg
gctcctactgtatctgcaaaaaccattgcagaacaacttgctgaaaagatcaatgccaag
cttaattacgtacctttggagaaacaagaagaagagagacaagatggtgggcagaatgaa
tcttttaagagatacgaggaagaattagagattaatgacttcccacagactgccaggtgg
aaagttacctctaaggaagctctgcagagaattagtgaatattctgaggctgcaattacc
atcagaggaacgtactttccacctgggaaagaacccaaggaaggagagaggaaaatctac
ttggctattgaaagtgccaatgaactggcagtgcaaaaagcaaaggcagaaatcaccagg
ctcataaaagaagaactaatccggttgcaaaattcatatcaaccaacaaataaaggaaga
tacaaagtcctgtag
DBGET
integrated database retrieval system
