Sorex araneus (European shrew): 101542084
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Entry
101542084 CDS
T07854
Symbol
POU5F1
Name
(RefSeq) POU domain, class 5, transcription factor 1
KO
K09367
POU domain transcription factor, class 5
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101542084 (POU5F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sara03000
]
101542084 (POU5F1)
03021 Transcription machinery [BR:
sara03021
]
101542084 (POU5F1)
Transcription factors [BR:
sara03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
101542084 (POU5F1)
Transcription machinery [BR:
sara03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
101542084 (POU5F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
AcnX
HOCHOB
Motif
Other DBs
NCBI-GeneID:
101542084
NCBI-ProteinID:
XP_004619648
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MAGHLASDFAFSPPPGGGGDGPGGPEPGWVDPRTWLSFPGPPGGSGIGPGVGPGAEVWGI
PPCPPPYEFCGGMAYCGSQVGMGLVPQAGLDTPQPEGEPGAGAESNSEGASPEPCVVPQV
AVKLEKEKLEQNPEESQDIKVLQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFS
QTTICRFEALQLSFKNMCKLRPLLQKWVEEADNNENLQEICKAETLVQARKRKRTSIENR
VRGNLESMFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDYEA
AGSPFTGAPVSFPLAPGPHFGTAGYGGSPFTTLYSSVPFPEGEAFAPMAVTALGSPMHSN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacacctggcttccgactttgccttctcgcccccgccgggcggtggaggggac
gggccgggagggccggagcccggctgggtcgacccccggacctggctgagcttcccaggc
ccgcccggcgggtcggggatcgggccgggggtcgggcctggcgctgaggtgtggggcatc
cccccgtgcccccctccgtacgagttctgcggggggatggcgtactgtggctcgcaggtg
ggaatggggctggtgccccaggctggcctggacacccctcagcccgagggcgagcccggc
gcgggggcggagagcaactccgaaggggcctccccggagccctgcgttgttccccaagtg
gccgtgaagctggagaaggagaagctagagcagaatcccgaggagtctcaggacatcaaa
gtgctacagaaggaacttgagcagtttgctaagcttctgaagcagaagaggatcaccttg
ggatatacccaggccgatgtggggctcactctgggggttctctttgggaaggtgttcagc
caaacgaccatctgccgtttcgaggcactgcagctcagcttcaagaacatgtgtaagctg
cggcccttgctgcaaaagtgggtggaggaagcggacaacaatgaaaatctacaggagata
tgcaaagcagagacccttgtgcaggcccgcaagagaaagcgaactagcatcgagaaccga
gtgaggggcaacttggagagtatgttcctgcagtgccccaagcccacgctgcagcagatc
agccacatcgcccagcagctcgggctcgagaaggacgtggtccgagtgtggttctgcaac
cgccgccagaagggcaagcgatccagcagtgactacgcccagcgggaggattatgaggct
gctgggtctcctttcacgggggcccccgtatcctttcctctggcaccagggccccacttt
ggtaccgcaggctacgggggctctcccttcactacactctattcctcggtccctttcccc
gagggtgaggcctttgccccgatggctgtcactgctctgggctctcccatgcattcaaac
tga
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