Sorex araneus (European shrew): 101542514
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Entry
101542514 CDS
T07854
Name
(RefSeq) RNA-binding protein 12 isoform X1
KO
K24524
copine 1/2/3
K24526
RNA-binding protein 12
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sara03041
]
101542514
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sara04990
]
101542514
Spliceosome [BR:
sara03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101542514
Domain-containing proteins not elsewhere classified [BR:
sara04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
101542514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Copine
C2
RRM_1
vWA-TerF-like
VWA
Motif
Other DBs
NCBI-GeneID:
101542514
NCBI-ProteinID:
XP_004612582
LinkDB
All DBs
Position
Unknown
AA seq
1463 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRT
GGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANSSRSGPPPSSGMSGRVNLP
TTVPNFNNPSPTVVTAATSVHESNKNIQTFSTASIGTAPPNMGASFGSPTFSSTIPSTAS
PMNTVPPPPIPPIPAMPSMPPMPSIPPIPVPPPVPTLPPVPPVPPMPPVPSVPPMTPLPP
MSGMPPLNPPPVAPLPAGMNGSGAPMNLNNNLNPVFLGPLNPVNPIQMNSQSGVKPLPIN
PDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEAL
KRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQTHPPPQTLPRSKSPSGQKRS
RSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRN
EADYKAALCRHKQYMGSRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREMMLNPEGDVS
SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARK
SERLHRKKLNGREAFVHVVTLEDMREIEKNPPAQGKKGLKMPVPGNPAVPGVPNAGVPGA
GVPGAGVPSAGVPGSGVPSAGVPGAGVPGAGMPGAGVPGIPGAGGEEHAFLTVGSKEANN
GPPFNFPGNFGGSNAFGPPLPPPGLGGAFGDVRPGMPSVGNSGLPGLGLDVPSFGGGPNN
ISGPGFGGGPQNFGNGPGGLGGPPGFGTGPPGLGSAPGHLSGPPAFGPGPGPGPIHIGGP
PGFGSSSGKPGPTVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVA
FESRDEATAAVFDLNDRPIGSRKVKLMAHCVTLVQLSVSCDHLIDKDVGSKSDPLCVLLQ
DVGGGSWAELGRTERIRNCSNPEFSKTLQLEYHFETVQKLRFGIYDIDNKTPELGDDDFL
GAAECSLGQIVSSQTVTLPLMLKPGKPAGQGTITVSAQELKDGRVVTLEVEARNLDKKDF
LGKSDPYLEFFRQDNGKWQLTYRSEVIKNNLNPTWKRFSVPLQHFCGGDPSTPLQVRCSD
YDSDGSHDLIGSFHTSLAQLQAAPAEFECIHPEKQQKKKSYRNSGTVRVKICQVETEYSF
LDYVMGGCQINFTVGIDFTGSNGDPSSPDSLHYLSPTGVNEYLTALWSVGSVVQDYDSDK
LFPAFGFGAQVPPAWQVSHEFALNFNPSSPYCAGIQGIVDAYRQALPQVRLYGPTNFAPI
INHVARFATQAAHQRTASQYFVLLLLTDGAVTDVEATREAVIRASHLPMSIIIVGVGGAD
FDAMEQLDADGGPLRSRSGEAAARDIVQFVPYRRFQNAPRETLAQTVLAEVPTQLVSYYK
AQGWAPVKPLSPTAKGPAQAPQA
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgtttgcaaggtctcccaattgtggcggggaccatggacattcgc
cacttcttctctggattgaccatccctgatgggggcgtgcatattgtagggggtgaactg
ggtgaggctttcatcgtttttgccactgatgaagatgcaaggcttggtatgatgcgcaca
ggtggtacaattaaagggtcaaaagtaacactattgttgagtagtaaaacggaaatgcag
aatatgattgaactgagtcgtaggcgttttgaaactgccaacttagatataccaccagca
aactctagtagatcaggaccgcctcctagctcaggaatgagtggcagggtaaacttacct
acaacagtacccaactttaataatccttcacccactgtagttactgctgctacttctgtt
catgaaagcaacaaaaatatacagacattttccacagccagcataggaacggctcctcca
aatatgggggcctcctttgggagcccaacgtttagctcaactataccaagcacagcctct
ccaatgaacacagtcccaccaccaccaattcctccaatcccagcgatgccatctatgcca
ccaatgccgtctattcccccaatacccgttcctcctccagtacctacattgcctcctgtg
cctcctgtgcccccaatgcccccagtaccttctgtgccacccatgaccccattgccaccc
atgtcaggtatgccacccttgaaccctccacctgtggcaccactacctgctggaatgaat
ggctctggagcacctatgaatctgaacaataacctgaaccctgtgtttctgggtccattg
aatcctgttaatcctatccagatgaactctcaaagcggagtgaaaccacttcccatcaat
cctgatgatctttatgttagtgtacatggaatgcccttttctgcaatggaaaatgatgtc
agagattttttccatgggctccgtgttgatgcagtgcacttgttgaaagatcatgtgggt
cgaaataatgggaatggattggttaagttcctctcccctcaagatacctttgaagctttg
aaaagaaacagaatgctgatgattcaacgttatgtggaagttagccctgccacagagaga
cagtgggtagctgctggaggccatatcacttttaagcaaagtatgggaccttctggacaa
acccatccccctcctcagacacttcccagatcaaaatcgcccagtgggcagaaaagatca
aggtcaagatcaccacatgaggctggtttttgtgtttatttgaaagggttaccatttgaa
gcagaaaacaagcatgtcattgatttttttaagaagttggatattgtggaagatagtatt
tatattgcttatggacccaatgggaaagcaactggtgaaggcttcgtagagttcaggaat
gaggctgactataaggctgctctatgtcgacataaacaatatatgggcagtcgttttatt
caagttcatccaataactaagaagggcatgctagaaaagatagatatgattcgaaaaaga
ctgcaaaacttcagctatgaccagagggaaatgatgttgaatccagagggggatgtcagt
tctgccaaagtctgtgcccacattacaaatattccattcagcattaccaagatggatgtt
cttcagttcctagaaggaattcctgtggatgaaaatgctgttcatgttcttgttgataac
aatgggcaaggtctaggacaggcattggttcagtttaaaaatgaagatgatgcacgtaag
tctgaacgcttacaccgtaaaaaacttaatgggagagaagcttttgttcatgtagttact
ctagaagatatgagagagattgagaaaaatccccctgctcaaggcaaaaaggggttaaag
atgcctgtgccaggtaatcctgcagttccaggagtgcccaatgcaggagtgcccggtgca
ggagtgcctggtgcaggagtgcccagtgcaggagtgcccggttctggagtgcccagtgca
ggagtgcccggggcaggagtgcctggggcaggaatgcccggcgctggagtgcctgggatt
cctggtgcaggaggtgaagagcatgccttcctgaccgtagggtctaaggaagccaataat
gggcctccatttaactttcctggtaattttggtgggtcaaatgcctttggaccaccactc
cctcctccaggattaggaggggcctttggtgatgttaggcctggtatgccttccgttgga
aatagtggtttgccgggtttaggactggatgttccaagttttggtggtggaccaaataat
ataagtgggccaggatttggagggggccctcagaattttggaaatggtcctggtggctta
ggtggccctcctggctttggaactggccctcctggtcttgggagtgcccctgggcatttg
agtggaccaccagcctttgggcctgggcctggccctgggccaatccatattggtggtccc
cctggctttggatctagttctggaaaaccaggaccaactgtaattaaagtgcagaatatg
cccttcactgtgtctattgatgagattctagatttcttttatggttatcaagtgatccca
ggctcagtatgtttaaaatacaacgaaaaaggtatgcccacaggtgaagccatggtggcc
ttcgaatctcgtgatgaagccacagctgctgtctttgatttaaatgacagacctattggc
tcaaggaaagtaaaacttatggcgcactgtgtgacattggttcagctctccgtttcctgt
gaccacctcattgacaaggacgttggctccaagtctgacccgctctgcgtccttttacag
gatgtgggagggggcagctgggcagagcttggccggactgaacgaatacggaactgttcg
aacccggagttctccaagactctgcagcttgagtaccactttgaaacggtccagaagctt
cggtttggtatctatgacatagacaacaagacgcctgagctgggggatgatgatttccta
ggggcggccgagtgttccttaggacagattgtgtccagccagacagtaactctgcccttg
atgctgaagcctggaaagcctgctgggcaggggaccatcacggtctcagcacaggagctg
aaagatggtcgcgtcgtgaccttggaggtggaggccagaaacctcgacaaaaaggatttc
ctgggaaaatcggacccgtacttggaattcttccgccaggataatgggaagtggcagctc
acatacagatctgaggtaatcaagaacaacctgaaccctacatggaagcgtttctctgtt
ccccttcagcacttctgtgggggggaccccagcacccctctccaggtgcggtgctcagac
tatgacagcgacggttcccatgatctcatcggttccttccacactagcctggcccagctg
caagctgccccggccgagtttgaatgcattcaccctgagaaacagcagaaaaagaaaagc
tacaggaattctggaacagtccgtgtgaagatttgccaggtggaaacagagtattccttc
ctggactacgtgatgggaggctgccagatcaacttcactgtagggatcgacttcacgggc
tccaatggcgacccctcctcaccggactccctgcactacctgagcccgacaggggtgaat
gagtacctgacggcgctgtggagcgtgggcagcgtggtccaggactatgactcagacaag
ctgttcccagcttttggatttggggcccaggtgccccctgcctggcaggtctcccatgaa
tttgcattgaacttcaaccccagtagcccttactgtgcaggtatccagggcattgtggat
gcctatcgccaagccttgccccaggtgcgcctctatggccccaccaactttgctcccatc
atcaaccatgtggccaggtttgcgacacaggctgcgcatcagaggacagcctcgcaatat
tttgtgctgttgctgctgacggatggtgctgtgacagacgtggaggccacacgtgaggct
gtgatccgggcctcccacctgcccatgtccatcattattgtgggcgttggcggggctgat
ttcgatgccatggagcagctggatgctgacgggggacccctgcgttctcgctccggagag
gcagctgcccgtgacattgtgcagtttgtaccctaccgccgctttcaaaatgcccctcgg
gagacactggcacagactgtgctcgcagaagtacccacacaattggtctcctactacaag
gcccaaggttgggccccagtcaagccactttcacctacagccaagggacctgcacaagcc
ccccaggcctag
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integrated database retrieval system
