Sorex araneus (European shrew): 101542519
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Entry
101542519 CDS
T07854
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X2
KO
K04842
voltage-gated sodium channel type X alpha
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sara04040
]
101542519 (SCN10A)
Ion channels [BR:
sara04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101542519 (SCN10A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
Na_trans_cytopl
GPHH
CcmD_alt
IQ
Motif
Other DBs
NCBI-GeneID:
101542519
NCBI-ProteinID:
XP_004614620
LinkDB
All DBs
Position
Unknown
AA seq
1947 aa
AA seq
DB search
MEFPFGSLETTNFRRLTPESLVEIEKQIAAKKAAKKVKKKCKEQKDEKEKPRPQLDLKAC
NQLPKFYGELPDELVGEPLEDLDPFYSTYRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLKFSLLITITILTNCVLMTRTDVPEKVEYVFTGIYTFEALIKILARGF
CLNKFTYLRDPWNWLDFSVITLAYVGEAIDLRGVSGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCLKNCSLLNDMDNYSYETQDDI
FYVKNGTNDPLLCGHGSDAGHCPPGFLCLKTAGNPDYNYTSFDSFSWAFLSLFRLMTQDS
WERLYQQTLRASGKIYMIFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDEIEAKEKK
FQEALELLRKEQEVLEVLGVDIESLHSYSGSPPAFKHLSDQRQRMKKKMSEGSIEENKSP
QSEIYNQRRMSFLGLTPGRRRASHGSVFHFRPPGRDVSFSDGTTDDGVLSGDQESHRGSL
LLGGGAGQQGPLSKSPLPEAPNPGLGEDGHTALPANELGPGPIEVSASDTAQKNFLSAEY
LNESFHSKRAMSVVSIMTSVLEELEESERRCPPCVTTLTQKYLIWECSPLWLKFKKILFE
IVTDPFTELAVTFCIVVNTVFMAMEHHGMSREFETMLQIGNYVFTGFFTAEMVLKIIAFD
PYYYFQKKWNIFDCIIVTISLMELGMSKKGSLSVLRTFRLLRVFKLAKSWPTLNTLIKII
GNSVGALGNLTFILAIIVFIFALVGKQLLGDSYKERRFKIAASNEPWPRWHMYDFFHSFL
IVFRILCGEWIENMWSCMQVGQQSICLVLFLMVMVLGNLVVLNLFIALLLNSFSADNLAA
PEEDGEVNNLQVALARIQAFGGRTRKALCSFFRRPCLLPQPKAEPQELVVKLPLSNSKAD
NHVPPEPPKEPKDELTDFITNANVWVSVPIAEAESDLEDPEEDEEDAQSPRQEVMPSTQP
EVLPQAKTCEDPLTPKSPDLRTSSEDLGSYLGEKWKSRTTEPPVEGADDTSSSEGSTVDC
PDPEEMLRKIPELAEDLEVPDDCFTEGCVRHCSCCQVDTTKSPWATAWQVRKICYRIVEH
SWFESFIIFMILLSSGALAFEDYYLDEKPNVKKLLEYTDRVFTFIFVFEMLLKWTAYGFT
KYFTNAWCWLDFLIVNISLTSLVAKILQYSDIAPIKALRTLRALRPLRALSRFEGMRVVV
DALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWKCIDIANDAFSLVPVDNVTNKTE
CEIKNYTKTYFWVNVKVNFDNVGMGYLALLQVATFKGWMDIMYAAVDSRTEVDMQPRWED
NVYMYLYFVVFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLG
SKKPQKPIPRPLNKYQGFVFDIVTRQAFDIIIMVLICLNMITMMVETDEQSEEKTKVLNK
INQFFVAVFTGECVMKMFALRQYYFTNGWNVFDFIVVILSIGSLVFSVILKSLENYFSPT
LFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMASFP
NVKYEAGIDDMFNFKTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPTVNNTNGSLG
DCGNPAVGIIFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLSEDDFDMFYETWEK
FDPEATQFIAFSALSDFADTLSGPLRIPKPNQSILIQMDLPLVPGDKIHCLDILFAFTKN
VLGESGELDSLKTNMEEKFMATNLSKASYEPIATTLRWKQEDISATIIQKAYRSYVLHRS
ITLCNPQRVSRAEEETGSLPGGDFPGAFTANEHCILPDKSATASAASFPPSYDSVTRGLS
DQVNMSTSSSMQNEDEDMSKTATAPGP
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctttgggtccctggaaactaccaacttccgccgactcaccccggagtcc
cttgtggagattgaaaaacaaatcgctgccaagaaggctgcaaagaaagttaaaaagaag
tgcaaggagcagaaggatgaaaaagagaagcctcggccccagctggacttgaaagcctgc
aaccagctgcccaaattctatggggagcttccagatgagttggtcggtgagcccctggag
gatctggaccccttctacagcacatacaggacattcatggtgctgaacaaagggaggacc
atttcccgctttagtgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtctgtccactcatatcctttgaagttcagtttacttattact
atcactattttgactaattgtgtgttaatgacccgaactgatgttccagagaaagttgag
tatgtcttcactggcatttatacctttgaagccttgataaagatactggcaagagggttt
tgcctaaataagttcacttacctccgagacccttggaactggctggatttcagcgtcatc
acactggcatacgtcggtgaagccatcgatctccgaggggtgtcaggcctgaggaccttc
agagttcttagagctttaaagaccgtgtctgtgataccagggctcaaggtcatcgtggga
gcccttatccactcagtgaggaagctggccgatgtgaccatcctcactgtcttctgcctg
agcgtgtttgccctggtgggtctgcagctctttaagggtaaccttaaaaacaaatgtctc
aagaattgcagccttctgaacgacatggacaattactcctatgaaacacaagatgacatt
ttctacgtgaagaacggcaccaatgatcccttactctgtggccatggatctgatgcaggc
cactgccctcctggttttctgtgccttaaaactgctggcaacccggattataactacacc
agctttgattccttctcctgggccttcctctcactcttccgcctcatgacacaggattcc
tgggaacgcctctaccagcagaccctgagggcttctgggaaaatctatatgatttttttt
gtgcttgtcatcttcctgggatctttctacctggtcaatctaatcttggctgtggttacc
atggcctatgaagaacagaaccaagcgaccattgatgaaattgaagcaaaggagaagaag
ttccaagaggcccttgagctgctccgaaaggaacaggaggtcctagaagtactaggcgtg
gacatagaatctctccactcctacagtgggtcacctccagctttcaaacatctcagtgat
cagaggcagaggatgaaaaagaagatgtcagagggctccatagaggagaacaaatcccca
cagtctgagatttacaaccagcgccggatgtcttttctaggccttacccctgggagacgc
cgagccagccatggcagtgtgttccatttccgcccccctggccgagatgtctcattttct
gatggaaccacagatgatggagtcttgtcaggagaccaagaaagtcatcggggatcccta
ctgctgggcggaggtgcaggtcagcaaggtcctctctctaagagcccattgcctgaagct
cccaaccctggacttggggaagatggacacaccgccctgccagctaacgagcttggccct
ggccccatcgaagtctcagcctcagacactgcacagaagaacttcctgtcggcagaatac
ttgaatgaatctttccactcgaaaagggccatgagtgtggtcagtatcatgacctccgtc
ctcgaagaacttgaggagtccgaacggaggtgtccaccttgtgtgaccacattgacacag
aaatatctgatctgggagtgcagccccctgtggttgaagttcaagaagattctctttgag
attgtgacggacccctttacggagctcgccgtcaccttttgcatcgtggtgaatacagtc
ttcatggcgatggagcaccatggaatgagcagggagtttgaaaccatgctccagataggc
aactatgtcttcactgggtttttcactgctgagatggtcctcaaaatcatcgcctttgat
ccctactattacttccagaagaagtggaacatctttgactgcatcattgtcaccataagc
ctgatggaactaggcatgtccaagaagggaagcctgtcggtgctgcgaaccttccgcctg
ctacgggtctttaagctggccaagtcctggcccaccctaaacacactcatcaagatcatt
ggaaactcagtgggagcactggggaacctcaccttcatcctggccatcattgtctttatc
ttcgctctggttggcaagcagctcctcggggacagctacaaggagagacgattcaagatt
gctgcctccaacgagccctggccccgctggcacatgtacgacttcttccactccttcctc
atcgtcttccggatcctctgtggagagtggattgagaacatgtggtcgtgcatgcaagtg
ggccagcagtccatctgcctcgtccttttcctgatggtgatggtgctggggaacttggtg
gttctcaacctgttcatcgccctgctactgaactccttcagcgctgacaacctcgcggcc
ccagaggaggacggcgaagtgaacaacttgcaggtggccctggcccggatccaggcattt
ggtggtcggaccaggaaggccctttgcagcttcttcaggaggccctgcctgctgccccag
cccaaggcagagccccaggagctggtggtaaaactccccctttccaactctaaagcggac
aaccacgtcccaccggagcctccgaaggagcccaaggatgagctcactgacttcatcacc
aatgcgaatgtgtgggtctctgtgcccattgctgaggctgagtctgacctcgaggacccg
gaagaagatgaggaggatgcgcagagccccaggcaggaagtgatgccctcaacgcagcca
gaggtgctgcctcaagccaagacctgtgaggaccccctgacgcctaaaagcccagacttg
agaacatcttctgaggatctgggttcgtacctgggtgagaagtggaagagcaggaccacg
gagccccctgttgagggggcagacgacaccagctcctccgagggtagcaccgtggactgt
ccagatccagaggagatgctgaggaagatcccggagctggctgaggacctcgaggtgcct
gacgactgcttcacagaaggctgtgtccggcactgttcctgttgccaagttgacaccacc
aagtccccatgggccacggcctggcaggtgcgcaaaatctgctaccgcatcgtggagcac
agctggttcgagagcttcatcatcttcatgatcctgctcagcagtggcgcgctggccttt
gaagactattaccttgacgagaagcccaatgtgaagaagttgctggaatacacggaccgg
gtgttcaccttcatctttgtgtttgagatgctgctcaagtggacagcttatggcttcacg
aagtacttcaccaatgcctggtgctggctggacttcctcatcgtgaatatctcactgaca
agcctggtagcaaagatcctgcagtattctgacattgcacccatcaaagcccttcggacc
ctgcgtgccctgaggcccctgcgtgcactgtctcgatttgaaggcatgagggtggtcgtg
gacgccctggtgggcgccatcccgtccatcatgaacgtcctccttgtctgcctcatcttc
tggctcatcttcagcatcatgggtgtgaacctcttcgccggcaagttttggaaatgcatt
gacatcgccaatgatgcattttctcttgtgcctgtggataatgtgacaaacaagactgag
tgtgaaattaaaaactacaccaaaacctatttctgggtcaatgtgaaggtgaacttcgat
aatgttggcatgggttacctcgcgctcctgcaggtggcaactttcaaaggctggatggat
atcatgtatgcggctgtggattcccgaacagaggtggacatgcagccccggtgggaagat
aacgtgtatatgtacctgtactttgtcgtcttcatcatttttggtggcttcttcacgctc
aacctctttgttggggtcataattgacaacttcaatcagcagaaaaaaaagttagggggc
caggacatcttcatgacggaagagcagaagaagtactacaacgccatgaagaagttgggc
tccaagaagccccagaagcctatcccgcggcccctgaacaagtaccagggcttcgtcttt
gacatcgtgaccaggcaagcttttgacatcatcatcatggttctcatctgcctcaacatg
atcaccatgatggtggagactgacgagcagagtgaagaaaagacaaaagtgcttaacaaa
atcaaccagttctttgtggctgtgttcaccggggagtgtgtcatgaagatgttcgccttg
aggcagtactacttcaccaatggctggaatgtgtttgattttattgttgtgatcctgtcc
attgggagcctggtattttctgtgattcttaagtcacttgaaaattacttctctcccacc
ctcttccgcgtcatccgcctggctcgcatcggccgcatcctcaggctgatccgagcagcc
aagggcatccgcacgctgctcttcgccctcatgatgtccctgcccgccctcttcaacatc
gggctgctgctcttcctcgtcatgttcatctactccatcttcggcatggccagcttcccc
aacgtaaagtacgaggctggcattgacgatatgttcaatttcaagaccttcgccaacagc
atgctgtgcctcttccagatcaccacgtcggcgggctgggacgggctcctgagccccatc
ctcaacacggggcccccctactgtgaccctactgtgaacaacaccaacggctctttaggg
gactgtggcaacccagccgtgggcatcatcttcttcaccacatacatcatcatctccttc
ctcattgtggtcaacatgtacatcgcagtgatcctggagaacttcaatgtggccacggag
gagagcacagaacctctgagcgaggatgatttcgatatgttctatgagacctgggagaag
ttcgacccagaggccacccagttcattgccttttcagccctctcagactttgcagacacc
ctctcaggccccctacgaatcccaaagcccaatcagagtatattgattcagatggacctg
cccttggtccctggagataagatccactgtttggacatcctttttgccttcaccaagaat
gttctgggagaatccggagagttggattcactgaagacaaatatggaagagaagtttatg
gcaactaacctttccaaagcatcctatgagccaatagcaaccaccctccggtggaagcaa
gaagatatttcagccactatcattcaaaaggcctatcggagttatgtcctacaccgttcc
atcacactctgcaacccccagagggtatccagggctgaagaggaaactgggtcactccca
ggtggagactttcctggtgcttttacggcaaatgaacattgtatactcccagacaaatct
gcaactgcctctgccgcatctttcccaccatcctatgacagtgtcactagaggccttagt
gaccaagtcaacatgagtacatccagctcaatgcaaaatgaagatgaagatatgagtaag
acagcaactgcccctgggccctag
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integrated database retrieval system
