Sorex araneus (European shrew): 101542531
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Entry
101542531 CDS
T07854
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sara03021
]
101542531 (CHD1)
03036 Chromosome and associated proteins [BR:
sara03036
]
101542531 (CHD1)
Transcription machinery [BR:
sara03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
101542531 (CHD1)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
101542531 (CHD1)
SLIK complex
101542531 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CHD1-like_C
CDH1_2_SANT_HL1
Helicase_C
Chromo
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
101542531
NCBI-ProteinID:
XP_004618968
LinkDB
All DBs
Position
Unknown
AA seq
1706 aa
AA seq
DB search
MNGHSDEESARNSSGESSQSDDGSGSASCSGSGSSSASSSDGSSSHSGSSDSDSGSESGS
QSESESDTSRESKVQAKPPRVDGAEFWKSNPSILAVQRSAVLKKQQQQQQTSSNSGSEED
SSSSEDSDDSSSEIKRKKHKDEDWQMSGSGSPSPSGSDSGTEEGEKSSCDETESDYEPKN
KVKSRKPQNRSKSKNGKKILGQKKRQIDSSEEEEDDEDYDNDKRSSRRQATVNVSYKEDE
EMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGDPNAG
FEKNKEQGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNA
SPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDG
ALISKKFQPCIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQL
NGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQ
REIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGGL
NWAFIGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNSLKELWSLLHFIMPEKFS
SWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYY
KWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRS
SGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQA
LDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQ
VNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELS
AILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVANFSN
MDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSE
GRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLE
RLDAIARDAELVDKSEIDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPTFRISG
VQVNAKLVISHEEELMPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIY
EYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQRLS
GAGGSKRRKARGKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKLNESKADSKEKSKKS
SVSDAPVHITASGEPVPISEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQL
EHTRQCLIKIGDHITECLKEYAHPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKR
QESQQNNDQNSNLNAHGIRNPDVERLKDSTNHDDSSRDSYSSDRHLAQHHDHHKDRHQGD
SYKKNDSRKRPYSSFSNGKDHRDWDHYKQDSRYYGDREKHRKLDDHRSRDHRSGLEGSLK
DRSHSDHRCHSEHRLHSDHRSGSEYMHHKSSRDYRYHSDWQMDHRASSSGPRSPLDQRSP
YGSRSPFEHSVEHKSTPEHAWSGRKT
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgctagaaacagtagtggagaatcaagccagtcg
gatgacgggtccgggtcagcctcatgctctggctctgggtcgagttctgcaagcagcagc
gatggaagcagcagccactcgggaagcagtgactctgactcggggtcggagtcgggcagc
cagtccgagtccgagtccgatacgtcccgggagagcaaggtccaggcgaagccaccgaga
gttgacggggctgagttttggaaatctaaccccagtattctggctgtgcagagatctgca
gtgctcaagaagcagcagcagcagcagcagacttcttccaacagtggatcagaagaggat
tcttcgagcagtgaagattctgatgactcatcaagtgagattaaaaggaaaaagcataaa
gatgaggactggcagatgtccgggtcggggtctccatcaccatctggctcagattccggg
actgaagaaggagaaaagagcagttgtgatgagacagagtctgattatgagccaaaaaac
aaagttaaaagcagaaaacctcaaaacagatcaaagtcaaaaaacggaaagaagattctt
ggacaaaaaaagagacagattgattcatccgaggaggaggaggatgatgaagattatgat
aatgataagagaagttctcgtcgccaagcaacagtcaatgttagctacaaggaggatgaa
gaaatgaagacggactctgatgacttactggaagtctgtggagaggacgtcccgcagccc
gaggaggaggagtttgagaccattgagaggtttatggactgtcggattgggaggaaagga
gctactggtgctactacaaccatctatgcggtcgaagcagatggtgacccaaatgcagga
tttgaaaaaaataaagaacaaggagaaatccagtatctaattaagtggaaaggatggtct
catattcataatacttgggagacagaagaaacccttaagcagcagaatgtcagaggcatg
aaaaaattggataattataagaaaaaagaccaggaaactaaaagatggttgaaaaatgct
tctccagaagatgtggagtattataattgccagcaggaactcacggatgatctgcataag
cagtatcaaatagtggagcggataatcgctcattccaatcagaaatctgccgctggttat
cctgattattactgcaaatggcagggtcttccgtattccgagtgcagctgggaggacgga
gctctcatctccaaaaagttccagccgtgcattgatgagtattttagcaggaatcaatca
aaaaccactccttttaaagactgcaaagtattaaaacaaaggccaagatttgtagccctg
aagaagcagccatcttacattggagggcatgaaggtttagaattaagagattatcagcta
aatggtttaaattggcttgctcactcttggtgcaagggaaatagttgcatacttgctgat
gaaatgggccttggaaaaactatccagacgatctcatttctgaactatttgtttcatgaa
catcagttatatggaccttttctgttagtagttccgctctccactctcacttcctggcag
agggaaattcaaacctgggcctctcagatgaatgctgttgtttacttaggcgacattaac
agcagaaatatgataagaacacatgagtggatgcatccccagaccaaaaggttaaaattc
aatatattgttaacaacttacgaaattttgttgaaggataaggcattccttggtggtctc
aactgggcatttataggtgttgatgaagcacaccggttaaagaatgatgactctcttctg
tataaaaccttaatagacttcaggtccaatcaccgtctcctcatcactggaacgcctcta
cagaactccctgaaagagctctggtctttgctgcattttatcatgccagaaaagttttct
tcctgggaagattttgaggaagaacatggcaaaggcagagaatatggctatgcaagcctt
cacaaggagcttgagccttttctgttacgcagagttaagaaagatgtggaaaaatctcta
ccagccaaggtggagcagattttaagaatggaaatgagtgctttacagaaacaatattac
aagtggatactgaccaggaattacaaagccctcagcaaaggctccaagggcagcacctca
ggctttctgaacatcatgatggagctaaagaaatgctgtaaccattgctacctcatcaaa
ccaccagataataatgaattctataacaaacaggaggccttacaacacttaatccgtagt
agtggaaaattgattcttcttgacaagctgttaattcgcctaagagaacgaggcaataga
gttcttattttttctcaaatggtgcggatgttagatattcttgcagaatatttgaaatat
cgccagttcccctttcagagattagatggatcgattaaaggggagctgaggaaacaagcg
ctggatcactttaatgctgaaggatcagaggatttctgttttttgctttccacacgagct
ggaggtctaggaattaatttagcctctgctgacactgttgtcatatttgattctgattgg
aatccacagaatgaccttcaggcacaagcccgagctcatcggattgggcagaagaaacag
gtgaatatttatcggctggttacaaagggatcagttgaagaagatattcttgaaagggcc
aaaaagaagatggttttggatcatcttgtgattcagagaatggacaccacagggaagaca
gtgctgcacacgggctccgccccctccagttctactcctttcaataaagaagaattatca
gccattttgaagtttggtgctgaagaacttttcaaggaacctgaaggagaagaacaggag
ccccaggaaatggacatagatgaaatcttgaagagggcggagactcacgaaaatgaacca
ggccctttgacggtgggggatgagctgctctcccagttcaaggttgccaacttttcaaat
atggatgaggatgatattgaattggaacctgaaagaaattcaaagaattgggaggaaatc
attccagaagatcaaagaagacgattagaagaggaagagagacaaaaggagcttgaagaa
atttatatgctcccaagaatgagaaactgtgcaaaacagattagtttcaatggtagtgaa
ggaaggcggagtagaagcaggagatactcaggttcagacagtgattctatctcggaaagg
aagaggccaaagaaacgtgggcggccacggactattcctcgtgaaaacattaaaggattt
agtgatgcagaaattcggcggttcatcaagagttacaagaaatttggtggccctctggaa
agattagatgcaatcgctcgagatgctgaattagttgataagtcagagatagatctcaga
cgactaggagaattagtacataatggttgtattaaagctttaaaggataattcttcagga
acagaacgaacaggaggtagacttggaaaagtgaagggtccaacatttcgaatatcagga
gttcaggtgaatgccaaattagtcatttcccatgaagaagaattaatgccactgcacaaa
tccattccttcagatccagaagaaagaaagcagtatactataccatgccatacgaaagca
gctcatttcgacatagactggggcaaggaagatgattccaatttgctaattggtatttat
gaatatggatatggaagctgggaaatgattaaaatggatcctgatctaagtttaacacac
aagattcttccagatgatcctgataaaaaaccacaagcgaaacaattgcagactcgtgca
gactacctcatcaaattacttagtaaagatcttgcaaaaaaagaagctcagagactttct
ggtgcaggaggttcaaagagaagaaaagcaagaggtaagaagaacaaagcaatgaaatct
ataaaagtaaaagaagaaataaagagtgattcttctccactgccctcagaaaagtctgat
gaagatgatgataagttgaatgaatccaaggctgacagtaaggaaaaatctaagaaatca
tctgtgtcagatgctcctgttcatataactgcgagtggtgagccagttcctatatctgaa
gaatctgaagagctagaccagaagacattcagcatttgtaaagaaagaatgaggcctgtc
aaagcagccttgaaacagcttgataggcccgagaaaggcctttcagaaagagagcagctg
gagcataccaggcagtgtctaataaagatcggcgaccacatcacagagtgtctgaaggag
tatgcgcatcccgaacagatcaaacagtggagaaaaaacctgtggatttttgtttctaag
tttactgaatttgatgcaagaaaactacataagttatataagcatgctattaaaaaacgg
caagaatctcagcaaaataatgaccagaacagcaatttgaatgctcacgggattaggaac
ccagatgtggaaagattgaaggacagcaccaaccacgacgacagcagcagggacagctac
tcgtccgacagacacttggctcagcatcacgaccaccacaaggaccgacaccaaggagac
tcttacaagaagaatgactccaggaaaaggccttattcttctttcagcaatggcaaagat
caccgtgattgggaccattacaagcaagacagcagatattacggtgatagagagaaacac
agaaaactggatgatcatagaagtcgagatcacaggtccggtttggaaggaagtttgaaa
gatagatctcattcggatcaccgctgtcactcagagcatcggttacattcggatcatcga
tcaggttctgagtacatgcaccataagtcatccagggattataggtatcactcagattgg
caaatggaccacagagcttccagtagtggcccaagatcaccgctagaccagagatctccg
tatggctccaggtctccgttcgaacattcagtggaacacaaaagtacacctgagcatgcg
tggagtggtcggaaaacataa
DBGET
integrated database retrieval system
