KEGG   Sorex araneus (European shrew): 101542641
Entry
101542641         CDS       T07854                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
sara  Sorex araneus (European shrew)
Pathway
sara03020  RNA polymerase
sara03420  Nucleotide excision repair
sara05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:sara00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101542641 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101542641 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    101542641 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sara03021]
    101542641 (POLR2D)
   03400 DNA repair and recombination proteins [BR:sara03400]
    101542641 (POLR2D)
Transcription machinery [BR:sara03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     101542641 (POLR2D)
DNA repair and recombination proteins [BR:sara03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101542641 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 101542641
NCBI-ProteinID: XP_004601729
LinkDB
Position
Unknown
AA seq 142 aa
MAAGGCDPRAADVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggctggcggctgcgacccgcgggcggccgacgtcgaggaggacgcgtcccagctc
atcttccccaaagagtttgaaacagccgagacgctcctgaattccgaagtgcacatgctt
ttggagcaccggaagcagcagaacgagagcgccgaggacgagcaggagctgtctgaggtc
tttatgaagactctgaactacacggcccgcttcagtcgcttcaaaaacagagagaccatt
gccagtgttcggagtttattactacagaaaaaactccataagttcgagctggcgtgtctg
gccaacctctgcccagagactgctgaggagtccaaggctctgatcccaagcctcgagggc
cggtttgaagatgaggagctccagcagatccttgacgacatccagacgaaacgcagcttc
cagtattga

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