Sorex araneus (European shrew): 101542676
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Entry
101542676 CDS
T07854
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin
KO
K06548
sialoadhesin
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101542676 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sara04090
]
101542676 (SIGLEC1)
04091 Lectins [BR:
sara04091
]
101542676 (SIGLEC1)
CD molecules [BR:
sara04090
]
Proteins
101542676 (SIGLEC1)
Lectins [BR:
sara04091
]
I-type lectins (Siglecs)
101542676 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Ig_4
Ig_5
C2-set_2
C1-set
Izumo-Ig
BiPBP_C
Ig_CD22
PKD
Motif
Other DBs
NCBI-GeneID:
101542676
NCBI-ProteinID:
XP_004611047
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MDILGPLVLLAASVSPGLGSWGVSSPQRVAGVQGSCLLIPCVFSYPDNVRVSDGITAIWY
YDQADSRKVVSHSAQPELVEARFRQRAQLVGQVMHRTCNLLLKQLQPEDAGTYKFRFEIN
GGDRWLDVIGTVVTVTAMPQTPTLVSPAMLLEGTEVDFNCSTPYACFMEPARLQWEGQDR
ARSATLDHQRVEPTGVSLTQILHMALSWRDHGRTLSCRVLLGAHQSQGQLQLQVQYTPKG
VSALLQPSEQNIRLGEQVTLTCHVNSSYPEVRSVQWLKDGQLLQVEGQVLQLPRVAWSDS
GLYACRAENSVGSSESAPVDLHIFTAEVQVSPAGTIVENQTVTLTCTMPREANGTRYSWY
KNQQLLEGAQDASLRLHPVRRADSGFYFCEVLNARGRARSGPVSLVVQYPPLAPVLTAFL
ETQGALVGLIHCSVSSEPPSTLVLARGRVVLASSEAGGQDPRLSVASGPNSLRVELRDLQ
PADRGQYRCVATNTLGKASSTLDFRDLAVRLLISPAAEVVEGQAVTLTCRRGLRPTPDTR
FSWYRNGVLLLEGPSSSLQLPAASSADAGSYHCRARDGDSAGGTSLAAVLTVLYAPRRPT
FTAQLDPEAAGRHGLLLCRVDSDPPALLRLLRGSRVLASSPGSCGGCPSRLKVTRGPNLL
RVEIADPVLEDEGAYLCEATNALGNASASATFDGRATVLLVTPSHVLQEGSTATLTCTVS
RDARAGAANVSWFRNGLPWAQGPQQTVTLQPVARRDAALYACRVLAEEGGQPSAPVVLSV
TYPPDPPKLSALLDVGQGRTALFVCTVDSQPPAQLSLFHGERCLATSPRAQLPPSDRLQL
RVTANSLQLEVRELGLEDSGSYRCEATNVLGSANTSLFFQVQGAWVHVSPSPELQEGQAV
VMSCQVPLGTPEGASYHWYRDGRLLPDSTSASLRFAAVTVSQAGAYHCQVQVPASASTSL
ATPVSLHVTHAPRQLALTTLMDTGPRRLGLLLCQAHSDPPAQLRLLHGDNLVASTLRGPE
EPASRSPRLQVTVAPNALRLEIHNATLEDEGVYSCQATNTLGQASASASFDAQAVSVQVW
PTLAVQEGQLANLTCQVWASRPAQLTYTWYRDGQQRPGARSIVLPNVTVADAASYHCSVA
LPGQAPRVSRPVALDVVYAPRNLRLTSLLESRGGRLALVQCTVDSRPPAQLALSHAGRVL
AASTAASSPNALLLELREPGPDQEGRYSCSAHNPLGQASASLELQLEVTQVTLAPSAAVP
EGTPVTVTCEDPAAHPPTLYTWYHNGRWLREGPATTLSFPRVSRAHAGAYMCQGQDAQGS
RSSRPTALRVLYAPRDAVLSSFRDSRASPAAVVQCTVDSEPPAELTLAHHGQVLATSADG
AVGTGQVQVARNALWLQVKDTPLGDGDTYVCTARNLLGSVSTRRLQAEGVRVVAEPGLDV
PEGAALNLSCQLPGGQGPGENATFSWLWNGRQLRAEPQPTLAFSHVARGQAGAYQCRARL
PAGTATSAAVLLRVLYPPDTPTMTVFVEAEGGAQGILDCRVDSEPLASLTLHLDGQLVAS
SQPRGGPAQPHTRVSASPNALRVAMEAPGAGDQGQYVCTASNALGSASASAYFGARALQR
LHLFQWLLWALGLLAAILLLLLVLGASCLWRRHSCSCRRRLCRQTNVGESSVEMMSPKET
LQVGR
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggacatcctcggcccgcttgtgctcctggccgcctccgtgtctccgggtctgggctcc
tggggcgtgtccagcccccagagagtggcgggtgtccagggctcctgcctcctgatcccc
tgcgtcttctcctaccccgacaacgtgcgggtgtctgatggcatcacggccatctggtac
tacgaccaggccgacagtcggaaggtggtgagccactcggcacagcctgagctggtcgag
gcccgtttccgccagcgggcgcagctggtggggcaggtgatgcaccggacgtgcaacctg
ctgctcaagcagctacagcccgaggacgccggcacctacaagttccgcttcgagatcaac
ggaggcgaccgttggttggacgtcataggcaccgtggtgaccgtcacagccatgccccag
acacccaccctggtgtcaccagccatgcttctggaaggcaccgaggtggacttcaactgc
tccaccccctacgcctgcttcatggagcccgcgaggctgcagtgggaaggccaggaccgc
gcccgctccgccaccttggaccaccagagggttgagcccacgggcgtcagcctcacgcag
attctccacatggcactgtcctggcgggaccacggccggacgctgagctgccgggtcttg
ctgggcgcacaccagagccagggccagctccagctccaagtgcagtatacccccaagggt
gtgtctgccctcctccagccttcggagcagaacatccgcctgggggagcaggtcaccctc
acctgccacgtgaacagcagctaccccgaggtccgctccgtgcagtggctcaaggatggc
cagttgctccaggtggagggccaggtgctgcagctgcctcgggtggcctggagtgactct
gggctctacgcctgccgcgcggagaacagcgtgggctcctcagaatcggcccccgtcgac
ctccacatcttcaccgctgaggtccaggtgagccccgcgggcaccatcgtggagaaccag
acggtgactctgacctgtaccatgcccagagaggccaacgggacgcgctacagctggtac
aagaaccagcagctcctggagggtgcccaggacgccagcctccggctgcaccctgtccgc
agggccgactccggcttctacttctgcgaggtgctgaacgcccgcgggcgggcacgctcg
gggcccgtcagcctggtggtccagtacccgcccctcgctcccgtgctgacggcctttctg
gagacgcagggggcgctggtgggcctcatccactgctccgtgtccagcgagcccccctcc
acgctggtgctggcccgggggcgcgtggtgctggcctcctcggaggcgggtgggcaggac
ccgcgcctcagcgtcgcctccgggcccaactccctgcgtgtggagctccgggacctgcag
cccgcagacagggggcagtaccgctgcgtggccaccaacaccctggggaaggcctcctcc
accctggacttccgtgacctggcagtgcgcctcctcatcagcccggctgcggaggtggtg
gagggacaggcggtgaccctgacctgcaggagaggcctgcgccccacgcccgacacccgc
ttctcgtggtaccggaatggggtcctgcttcttgaggggcccagcagcagcctccagctc
ccggccgcctccagcgccgacgccggctcgtaccactgccgggcccgggacggtgacagc
gccggcggcacctccttggctgccgtcctgacagtgctctacgccccccgccggccaacc
ttcactgcccagctggaccccgaagccgccggccgccacgggctgctgctgtgccgcgtg
gacagcgacccccccgccctgctgcggctgctccgtgggtcccgcgtgctggcctcttcc
ccgggctcctgcgggggctgcccctcgcgcctgaaggtcactcgcggccccaacctgctc
cgcgtggagatcgcggaccccgtgctggaggacgagggcgcatacctgtgcgaggcgacc
aacgccctgggcaacgcctctgcctcggcgaccttcgacggccgggccacggtcctgctg
gtcacccccagccacgtgctgcaggagggcagcacggccaccctgacctgcaccgtgagc
agagacgcccgcgcgggcgccgccaacgtttcctggttccggaacgggctgccgtgggcg
cagggccctcagcagacagtgaccctgcagcccgtggccaggagggacgcagccctgtat
gcctgccgcgtgctggcggaggagggcggccagccctcggcccccgtggtcctgagcgtg
acgtaccccccagacccacccaagctgtccgcgctcctggacgtgggccagggacgcacg
gccctgttcgtctgcaccgtggacagccagccgcccgcccagctctccctgttccacggg
gagcgctgcctggccaccagcccgagggcccagctcccacccagtgaccgcctgcagctc
agagtcacagccaactccctgcagctcgaggttcgagagctgggcctggaggactccggc
agctaccgctgcgaggccacaaatgtcctggggtcagccaatacctccctcttcttccag
gtccaaggggcctgggtccacgtgtccccgtccccggagctccaagagggccaggctgtg
gtcatgagctgccaggtgcccctggggacccccgagggagcctcctaccactggtaccgg
gacggccgcctcctgccggactccacctcggccagcctccgctttgccgccgtgactgtg
agccaggctggggcctaccactgccaggtgcaggttccggcctcggccagcaccagcctg
gccacgccggtcagcctccacgtgacccatgccccgcgccagctggcactcaccaccctg
atggacacgggcccccggcgcctgggcctcctcctgtgccaggcccacagtgaccctccg
gcccagctgcgcctgctccacggggacaacctggtggcatccaccctgcgggggccggag
gaacctgccagccgctccccccggctgcaggtgaccgtggcccccaacgcactgcgcctg
gagatccacaacgccaccctggaggacgagggtgtctacagctgccaggccaccaacacc
ctgggccaggcctcggcctcagccagctttgacgcgcaggccgtgagtgtgcaggtatgg
cccacgctggccgtgcaggaggggcagctggcgaacctgacctgccaggtgtgggcctcc
cggccggcccagctcacctacacctggtaccgggacgggcagcagcggccgggcgcccgc
tccatcgtcctgcccaacgtcaccgtggccgacgcggcctcttaccactgcagcgtggcc
ctccctggccaggccccccgcgtctccaggcccgtggccctggacgtcgtctatgccccc
cggaacctccgcctgacctccctgctagagagccgcggcgggaggctggccctggtacag
tgcacggtggacagccgcccgcctgcacagctggccctcagccacgccggccgtgtcctg
gccgcctccaccgcagcctccagccccaacgccctgctccttgagctgcgcgagccaggc
cccgaccaggagggtcggtacagctgctccgcccacaaccccctcggccaggcctctgcg
tccctggagctgcagcttgaggtcactcaggtgacactggccccctcggccgccgtgccc
gaggggactcccgtcacggtgacctgtgaagacccagccgcccacccacccaccctctac
acctggtatcacaacggccggtggctgcgggaggggcccgcgaccaccctctccttcccc
cgggtctcccgggctcatgccggggcctacatgtgccagggccaggacgcccagggcagc
cgcagctcccggcccacagccctgcgcgtgctctatgcacctcgggacgctgtcctgtcc
tccttccgggactcgagggccagccccgcggccgtggtgcagtgcacggtggacagcgag
ccccccgctgagctgaccctggcccaccacggccaggtgctggccaccagcgctgacggg
gcggtgggcacaggccaggtccaggtggcccgcaacgccctgtggctgcaagtgaaagac
acgcccctgggggacggggacacgtacgtgtgcacagcccgcaacctgctgggctccgtc
agcaccaggcggctgcaggcagagggtgtgcgtgtggtggcagagccggggctggacgtg
cccgagggggcagcgctgaaccttagctgtcagctgcccggtggccagggcccgggggag
aacgccaccttctcctggctctggaacggccggcagctgcgtgcggagccccaacccacc
ctcgccttctcccacgtggcccgtggccaggccggggcgtaccagtgccgggccaggctc
cccgcagggacagccacctccgccgccgtcctgctccgagtgctctaccctccggacacg
cccacaatgacggtcttcgtggaggcggagggtggcgcccagggcatcctggactgccgg
gtggacagcgagcccctcgccagcctcaccctccacctggacggacagctggtggcctcc
agccagccccggggcggccctgcccagcctcacacacgcgtctcggcctcccccaacgcc
ctgagggtggccatggaggcgccaggggcgggcgaccagggccagtacgtgtgcacagcc
tccaacgcactgggctcggcctcggcctccgcctactttggagccagagccctgcagcgc
ctgcacctgttccagtggctactctgggcgctggggctgctggcggccatcctgctgctc
ctgctcgtcctgggggcctcctgcctgtggagacggcactcttgctcttgcagaaggagg
ctttgccgccagacgaacgtgggtgagagctcggtggagatgatgtctcccaaggagacc
ttgcaggtgggcaggtga
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