Sorex araneus (European shrew): 101542702
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Entry
101542702 CDS
T07854
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03320
PPAR signaling pathway
sara04659
Th17 cell differentiation
sara04919
Thyroid hormone signaling pathway
sara04920
Adipocytokine signaling pathway
sara04928
Parathyroid hormone synthesis, secretion and action
sara05200
Pathways in cancer
sara05202
Transcriptional misregulation in cancer
sara05207
Chemical carcinogenesis - receptor activation
sara05216
Thyroid cancer
sara05222
Small cell lung cancer
sara05223
Non-small cell lung cancer
sara05226
Gastric cancer
sara05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
101542702 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
101542702 (RXRB)
03320 PPAR signaling pathway
101542702 (RXRB)
04919 Thyroid hormone signaling pathway
101542702 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
101542702 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101542702 (RXRB)
05202 Transcriptional misregulation in cancer
101542702 (RXRB)
05207 Chemical carcinogenesis - receptor activation
101542702 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
101542702 (RXRB)
05216 Thyroid cancer
101542702 (RXRB)
05222 Small cell lung cancer
101542702 (RXRB)
05223 Non-small cell lung cancer
101542702 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101542702 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sara03000
]
101542702 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sara03310
]
101542702 (RXRB)
Transcription factors [BR:
sara03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
101542702 (RXRB)
Nuclear receptors [BR:
sara03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
101542702 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
101542702
NCBI-ProteinID:
XP_004617732
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPVGGAGPPEDVKPPV
LGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRD
NKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDR
ILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSL
PLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSR
VLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKY
PEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgccaccccctcccctaggctcccccttccctgtcatcagctcttccatgggctcccct
ggcctgccccctccagcgccccctggattctccgggcctgtcagcagcccccagattaac
tcaacagtgtcgctccctgtgggtggggctggcccccctgaagatgtgaagccaccagtc
ctaggagtccggggcctgcactgtccaccgccccctggtggccctggggctggcaaacgg
ctgtgtgcaatctgtggggaccgaagttcaggcaaacactacggggtttatagctgcgag
ggctgcaaagggttcttcaagcgaaccatccgtaaggacctgacctactcatgtcgcgac
aacaaggactgcacggtggacaagcgccagcggaaccgctgccagtactgccgctatcag
aagtgcctggccacgggcatgaagcgggaagcggtacaggaggagcgtcagcgggggaag
gacaaggacggggatggggagggggctgggggagcccccgaggagatgcctgtggacagg
atcctggaggcagagctggctgtggagcagaagagtgaccagggcgttgagggtcccggg
ggaaccgggggtagcggcagcagcccaaacgaccctgtgactaacatctgtcaggccgct
gacaaacagctgttcacgctggttgagtgggccaagaggatcccacacttctcctcgttg
cctctggatgaccaggtcatattgctgcgggcaggctggaacgagctgctcattgcctcc
ttttcccaccgatccattgacgtccgggatggcatcctcctggccacggggctccacgtg
caccgcaactctgcccactctgccggcgtgggtgccatctttgaccggtccctctccagg
gtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaagacagagctgggc
tgcctgcgggccatcattctgttcaacccagatgccaagggcctgtccaaccccagtgaa
gtagaggtcctgcgggagaaagtgtacgcgtccctggagacctactgcaagcagaagtac
ccggagcagcagggacggtttgccaagctgctgctccgtcttcctgccctcaggtccatc
ggccttaagtgtttagagcacctgtttttcttcaagcttattggcgacacccccatcgac
actttcctcatggagatgctggaggctccccaccagctggcctga
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