Sorex araneus (European shrew): 101542719
Help
Entry
101542719 CDS
T07854
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 15-like
KO
K20168
TBC1 domain family member 15
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101542719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101542719
Membrane trafficking [BR:
sara04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
101542719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
101542719
NCBI-ProteinID:
XP_012791010
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MAVAGVVSGKTIYEQEGVYIHSPCGKMQDQDSLIAGILCILEKDAEVIVDWRPLDDALDS
SSILYVKKDSSSVVEWTQAPKERAHRGSEHQNSYEAEWDMVNAVSFKKKPHINGDSSSHR
NGKSKWSFLFSLTDLKSIKQNKEGMGWSYLVFCLKDDVILPALHFHQGDSKLLIESLEKY
VVLCESPQDKRILLVNCQNKSLSQSFENLLDEPAYGLIQKIKKDPYTATMVGFSKVTNYI
FDSLRGNDPSTHHRPPSEMADFLSDAIPGLKINQQEEPGFEVITRIDLGERLVVQRREPV
SLEEWTKNTDSEGRILNVESMKQMIFRGGLSHSLRKQAWKFLLGYFPWDSTKEERTQLQK
QKTDEYFRMKLQWKSVSEEQEKRNSRLRDYRSLIEKDVNRTDRTNKFYEGQDNPGLILLH
DILMTYCMYDFDLGYVQRMSDLLSPLLYVMKNEVDAFWYFASYMDQMHQNFEEQMQGMKT
QLIHLCTLLRLLDSGFCSYLESQDSVYLYFCFRWLLIRFKREVSFLDSLQLWEVMWTELP
RKNFHLLICCAILESEKQQIMENHYGFNEILKHINELSMKIDVEDVLCKAEAISLQMVKC
KELPQAVCEILGLQNSDVTTPDSDTGEDENVGMTSCPTSAFQSNSLPVHAASGVRDDNPT
QSPVSPSVSRLTPARSFLLNFLRDILLQLFQNFERWKFKILMRPSPHACIPAQPQDPNSS
QRPAGRTPAPAATPQTPGFLLHPGAPQPLRLRTRSAPGTKLIPASPRQEPLPQPPHHKPS
ASSFVIQVRPSPHACTPIRPQDLNSSQRPADRTPAPAAAPQIPGFLLLHPAVPQPLRLRT
RSAQDPNSSPHSAGRTPNPAAMPQAPSFLLHPGVLQPLHLRAHSAPGSNSSQRPVRPISC
ACSEQGPELIPVVQGSDPCPSRHTADPQLPLHPGAQRPLHLRDRWAPAPELIPASRGWPQ
TLRLHTGSAPGPELIPRSYGQEPLPQPPSRRPPASSFFIQGQPQLFSPLPTPWTYISVPI
T
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcgggtgttgtgagcgggaagactatatatgagcaggaaggtgtctatatt
cattcaccttgtgggaagatgcaagaccaagacagcttgattgcaggaatattgtgtatt
ttagaaaaggatgctgaagtaattgtggactggagacctttggatgatgccttagattct
tctagtattctttatgtgaaaaaggactccagttcagttgtagaatggacccaggccccc
aaagaaagagctcatcgaggatcggaacatcagaacagttatgaagcagagtgggacatg
gtgaatgcagtttcatttaaaaagaagccacatatcaatggagattcttcaagtcataga
aatgggaaaagcaaatggtcattcctgttcagtttgacagacctgaaatcaatcaagcaa
aacaaagagggtatgggctggtcatatttggtattctgtctaaaggatgacgtcattctc
cctgctctacactttcatcaaggagatagcaaactactgattgaatctcttgaaaaatat
gtggtattgtgtgaatctccacaggataaaagaatacttcttgtgaattgtcagaataag
agtctttcacaatcttttgaaaatcttcttgatgaaccagcatatggtttaatacaaaaa
attaaaaaggatccttatacagcaacaatggtaggattttccaaagtcacaaactacatt
tttgatagtttgagaggcaatgatccttccacacatcaccggccaccttcggaaatggca
gactttcttagtgatgctattccaggtttaaagataaaccaacaagaagaaccaggattt
gaagtcatcacaagaattgacttgggagaacgacttgttgtacaaaggagggaaccagta
tccctggaagaatggactaagaacactgattcagaaggaagaattttaaacgtagagagt
atgaaacagatgatatttagagggggacttagtcattcattgagaaagcaagcatggaaa
tttcttctgggttattttccttgggacagcaccaaggaggaaagaactcaattacaaaag
caaaaaactgatgaatacttcaggatgaaactgcagtggaaatctgtcagtgaggagcaa
gagaagagaaattcgaggttaagggattatagaagtcttatcgaaaaagacgttaacaga
acagatcgaacaaacaaattttatgaaggccaagataatccagggttgattttgcttcat
gacattctgatgacctattgtatgtatgattttgatttaggatatgtgcaaagaatgagt
gacttactttcccctcttttatatgtgatgaaaaatgaagtggatgcattttggtacttt
gcctcctacatggaccaaatgcatcagaattttgaagaacaaatgcaaggcatgaaaacc
caattaattcacctatgtactttacttcgattgctggacagtggattttgcagttattta
gaatctcaggactccgtatacctttacttttgcttcagatggctcttaatcagatttaaa
agggaagttagttttctagatagtcttcaattatgggaagtaatgtggactgaactgcca
cgtaaaaacttccatcttcttatttgttgtgctattctggaatcagaaaagcagcaaata
atggaaaaccattatggctttaacgaaatacttaagcatatcaatgaattgtccatgaaa
attgatgtggaagatgtgctgtgcaaagctgaggcaatttctctacagatggtaaaatgc
aaagaattgccacaagcagtttgtgagatcctgggacttcagaacagtgacgttacaaca
ccagattcagacactggtgaagatgagaatgttggcatgaccagctgtcctacgtctgca
tttcagagtaactccttgcctgtacatgcagccagtggagtcagggatgacaacccaaca
cagtcaccagtgtccccaagtgtcagcagattaacacctgcacgatcattcttgcttaat
tttttaagagacattttgttgcaactctttcaaaattttgaaaggtggaaatttaaaatc
ttgatgcgccccagtccccacgcctgcatacccgctcagccccaggacccaaactcatcc
cagcgtcctgcgggtaggacccctgccccagccgccacaccgcagacccccggcttcctc
cttcatccaggtgcaccccagccgctgcgcctgcgcacacgctcagccccaggaaccaaa
ctcatcccagcatcccccaggcaggaacctctgccccagcccccgcaccacaaaccctcg
gcttcctccttcgtcatccaggtgcgccccagtccccatgcctgcacgcccattcggccc
caggacctgaactcatcccagcgtcctgcggataggacccctgcaccagctgcggcacca
cagatcccgggcttcctccttcttcatccagctgtgccccagcccctgcgcctgcgcacc
cgctcagcccaggacccgaactcatccccgcattccgcgggtcggacccctaacccagcc
gccatgccacaggcccccagcttcctccttcatccaggtgtgctccagcccctgcacctg
cgcgcccattcggccccaggatctaactcatcccagcgtcctgtgcgccccatctcctgc
gcctgctcggaacaaggacccgaactcatcccagtggtccaagggtcggacccctgcccc
agccgccacaccgcagacccccagcttccccttcatccaggtgcgcagcggcccctgcac
ctgcgcgaccgctgggccccagcacctgaactcatcccagcgtcccgcgggtggccccag
accctgcgcctgcacaccggctcagctccaggacctgaactcatcccaaggtcctacggg
caggagcccctgccccagccaccgagccgcagacccccggcttcctccttcttcatccag
gggcagccgcagttattttcccctctcccaacaccctggacttacatctcagtccccatt
acctaa
DBGET
integrated database retrieval system
