Sorex araneus (European shrew): 101542912
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Entry
101542912 CDS
T07854
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04140
Autophagy - animal
sara04211
Longevity regulating pathway
sara05010
Alzheimer disease
sara05014
Amyotrophic lateral sclerosis
sara05016
Huntington disease
sara05017
Spinocerebellar ataxia
sara05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101542912 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
101542912 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101542912 (RB1CC1)
05014 Amyotrophic lateral sclerosis
101542912 (RB1CC1)
05016 Huntington disease
101542912 (RB1CC1)
05017 Spinocerebellar ataxia
101542912 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
101542912 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sara01009
]
101542912 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101542912 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
sara03029
]
101542912 (RB1CC1)
Protein phosphatases and associated proteins [BR:
sara01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101542912 (RB1CC1)
Membrane trafficking [BR:
sara04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101542912 (RB1CC1)
Mitochondrial biogenesis [BR:
sara03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101542912 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Jag_N
Motif
Other DBs
NCBI-GeneID:
101542912
NCBI-ProteinID:
XP_004602392
LinkDB
All DBs
Position
Unknown
AA seq
1583 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAVHSKYKIAIPHQVLVVNGGECMAAERRVC
TYSAGTDTNPIFLFNKEMILCERPPTIPKTTFSTENDMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCASSYQRLLAKFESIYTSYLQ
SVEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSASEHERPEQAALRASAEL
PLSPDTPRAADRALAASFPKAADPAAPEAAEAGESCQSPAPQEEGAAETQDGALPLFNVS
LLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLED
RLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNH
RKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVRIVE
ALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFL
RNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEP
LHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASGSQTSPQSASSPRRESATGITTATS
PRTPPPLTVQDPLCPTVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQASLDLDSLAES
PESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNVCGKED
SGDHSLNTRLEKCRAVAQDSHFSIQTIKEDLCHFRTLVQKEQCDFSNSLKCTAVEIRNII
EKVKCSLEITLNEKHQKELQSLKSEYEGKLETLMKESEENENKIKKLKGELVCLEEVLQN
KDNEFALVKHEKEAVMCLQSEKEQKLLEMESIMHTQSCEISELRQSREVALEDLKKAHVE
NDEKIELLRAEFQCREQSHLKELEDTLQVRHTREFEKVLSDHRVSLEELKKENQQRIDQM
QASHASVLQEKEQQLQELKRKVSDLSDTRCKLEVELALKEAETDEVKMLLEESKAQQKEA
LRALLEQETEALRTEVSKLNQKIQDNNESYQVGLGELRTLMTIEKDQCISELISRHEEES
DMLKAELNKVTSLHHQAFEIEKKLKEEIVELQRKLDSELKALEKQKDEKISQQEEKYEAI
IQKLEQDKEGFVVSQERDREQLVQKLTCEKEEAIQAALKEFKLEREAVEKELLEKVKHLE
TQIAKSPAVESTREDSVSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQ
QTNFNTVLTREKMKKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEE
VSKLRGSSLGPPYGASAPELCGACAPPLPCEAERPADAEDGRVDSAMDTSMMSVQENIHM
LSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSARHSEKIAIRDFQVGDLVLIIL
DERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGATRRPWVLGKVMEKEYCQAKKAQ
NRFKVPLGTKFYRVKAVSWNKKV
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtatttctggttaacactggaactactctgacatttgacactgaactt
acagtgcaaaccgtggccgacctcaagcatgccgtgcacagcaagtacaagatcgccatc
ccgcaccaggtgctggtggtcaacggcggcgagtgcatggccgccgagcggagggtctgc
acctacagcgccggcacggacacaaacccaatttttctttttaacaaagaaatgatctta
tgtgaacgtccgcctacgattcctaaaaccaccttttcaacagaaaatgacatggaacta
aaagtcgaagagtctctcatgatgccggcagtgtttcacactgttgcttccaggacacag
cttgcagtggagatgtacgaagtggccaagaagctctgctccttctgcgagggcctcgtg
cacgacgagcacctgcagcaccagggctgggccgccatcatggccaacctggaggactgt
gccagctcctaccagcggctgctcgccaagttcgagagcatctacaccagctacctgcag
tctgtggaggacatcaagttgaagctcactcacttaggaactgcggtgtccgtgatggcc
aagatcccgctgctcgagtgcctgacccggcacagctacagggagtgtctggggaggctg
gactccgcgtctgagcacgagcgccccgagcaggccgcgctgagagcctccgccgagctg
ccgctctcccccgacacgcctcgagcagccgacagggccctggccgcctccttccccaag
gcagcggaccccgcagcccccgaggcggccgaggccggggagtcttgccagagtccggcc
ccgcaggaggagggcgcggccgagacgcaggacggggctctgccgctgttcaacgtctcc
ctgctggactggatcaacgtgcaggataggcccaacgacgtggagtctctggtccggaag
tgcttcgattctatgagcaggcttgatccaaggatcattcggccgttcatagcagagtgc
cgtcagactattgccaaactggacaaccagaatatgaaggcgatcaaagggctcgaggac
cgcctgtacgccctcgaccagatgatcgccagctgcagccgcctggtgaacgaacagaaa
gaacttgctcagggatttttagctaatcagatgagagctgaaaacttgaaagatgcatct
gtattacctgatttgtgcttgagtcatgcaaatcagttgatgattatgttacaaaatcat
agaaaactgttggatattaaacagaagtgtaccactgccaaacaagaactagctaataac
cttcatgtcagactgaagtggtgttgctttgtaatgcttcatgctgaccaagatggagag
aaactgcaggctttgctccgtctcgtcatcgagctcttggaaagggtcagaattgtcgag
gccctaagtacagttccgcagatgtactgcttagctgtcgtcgaggttgtcaggaggaaa
atgttcataaaacactacagggagtgggctggtgctttagtcaaggatggaaagcgatta
tatgaagctgaaaaatcaaaaagggagtcctttgggaaactgttcaggaaatctttctta
agaaatcgtctgtttaggggattggactcctggcctccttccttttgtactcagaagcct
cgaaagtttgactgtgaacttccagatatttcattgaaagatttacagtttctgcaatca
ttctgtccctcagaagttcagccattcctcagggtccctttactttgtgactttgaacct
ctacaccagcacgttctcgcgctacataatctggtcaaagcagcacagagtttggatgaa
atgtcccagaccattacagatctgctgagtgaacaaaaggcgtctgggagtcagacttcc
ccgcagtcggcttcctccccccgcagagaaagtgcgacaggaatcacaactgctacctca
ccgagaactcctcctccactcactgtccaggaccccctgtgtcccacggtctgtcccttg
gaagaattgtctccggatagcattgacgcacatacctttgattttgaaaccatccctcac
ccaaacatagagcagacaattcaccaggcgtccctagacctagattccttagccgagagc
cccgagtcggacttcatgtctgcggtgaatgagtttgtaatagaagagaacctttcatct
ccgaatcccatcagcgatccacagagtccggaaatgatggtggaatccctgtattcgtca
gtcatcaatgcaatagacagtaggcgcatgcaggatacgaacgtgtgtgggaaagaggat
tcgggagatcactctctcaacactcggttagaaaaatgccgagcggtggcccaagactct
cacttcagcatacagaccattaaggaagacctttgccacttccgaacattggtacaaaaa
gaacagtgtgacttctcaaattctctaaaatgcacagctgtagaaataaggaacattatt
gaaaaagtcaaatgctctctggaaataacactaaatgaaaagcatcaaaaagaactacag
tctctaaagagcgaatatgaaggtaaacttgagacactaatgaaggagagtgaggagaat
gaaaacaaaatcaagaaattgaaaggagagttagtatgccttgaggaggtcttacagaat
aaggataatgagtttgctctggtcaagcatgaaaaggaagctgtcatgtgcctgcagagt
gagaaggagcagaagctgctggagatggagagcatcatgcacacgcagagttgtgagatc
agtgagctcaggcagtcccgagaggtggcgttggaagacctgaagaaggcgcacgtcgag
aacgacgagaagattgagctgctgagggcggagttccagtgccgggagcagagccacctg
aaggagctggaggacaccctgcaggtcagacacacccgggagttcgagaaggtcctcagc
gaccaccgagtgtccctggaggaattgaaaaaggaaaaccagcaacgaatcgatcagatg
caagcgtctcacgccagcgtcctccaggagaaggagcagcagctgcaggagctgaagcgc
aaggtgtccgacctgtcggacacgcgctgcaagctggaggtggagctcgcgctcaaggag
gccgagaccgacgaggtgaagatgctgctggaggagagcaaggcccagcagaaggaggcc
ttgcgggcgctcctcgagcaggagacagaggccctgaggacggaagtcagcaagctgaac
cagaagatccaggacaataatgagagctaccaggtgggcttgggcgagttgaggactttg
atgacaattgaaaaagatcagtgcatctcagagctgatcagtaggcacgaggaagagtcg
gatatgcttaaggccgagttaaataaagtaacatctttgcatcatcaggcatttgaaata
gaaaaaaagttgaaagaagaaatagttgaactgcagagaaaattggactcagaattgaaa
gctcttgaaaaacaaaaagatgaaaagattagccaacaagaggagaagtacgaagctatc
atccaaaaacttgagcaagacaaagaggggtttgtcgtgagccaggaacgggacagggaa
cagttggttcagaagctcacttgtgagaaagaagaagccattcaggctgccctcaaggag
tttaaattggagagagaagctgttgagaaagaattgttagaaaaagttaagcatcttgag
actcagatagcaaaaagtcctgccgtggagtctactagagaagattctgtaagcttagtt
gctgaacttcaagaaaagcttcaggaagaaaaagctaaatttttagaacaacttgaagag
caggagaaaagaaaaaatgaggaaatgcaaaatgtccggacatctctgattgcagaacag
cagaccaacttcaacacggtcctgacgagagagaagatgaagaaggagaacatcatcaat
gacctcagcgacaagctcaagagcacgatgcagcagcaggagcgcgacaaagatctgatc
gagtcgctgtccgaggaccgagctcgtttgcttgaggagaagaagaagctggaggaggaa
gtcagcaagctgcgcgggagcagcctgggccccccctacggtgcctcggcccccgagctc
tgtggagcctgcgcccccccgctgccctgcgaggccgagcgcccggcagacgccgaggac
gggagagtggactccgcgatggacaccagcatgatgtctgtgcaagagaacatccatatg
ctttctgaagaaaagcagaggataatgctgttagaacgtacgctacagctgaaggaagaa
gaaaacaagcggctgaatcagcgactgatgtcgcagagtatgtcctcagtgtctgctcgc
cactcggagaagatcgcgattcgagacttccaggtgggggatctggtgctcatcatcctg
gacgagcgccacgacaactacgtgctgttcaccgtcagccccaccctctacttcctccac
tcagagtcgctgcccgccctggacctcaagccaggcgagggggcttcaggtgccactaga
agaccctgggtgcttgggaaggtgatggagaaggagtactgccaggccaagaaggcacaa
aacagattcaaagttcctctggggacgaagttttaccgagtgaaagccgtgtcgtggaat
aagaaggtatag
DBGET
integrated database retrieval system
