Sorex araneus (European shrew): 101542920
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Entry
101542920 CDS
T07854
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sara03019
]
101542920 (FUBP1)
03041 Spliceosome [BR:
sara03041
]
101542920 (FUBP1)
Messenger RNA biogenesis [BR:
sara03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101542920 (FUBP1)
Spliceosome [BR:
sara03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101542920 (FUBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
KH_KHD4_2nd
Secretin_N
KH_PARP10_1st
Motif
Other DBs
NCBI-GeneID:
101542920
NCBI-ProteinID:
XP_004603389
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MPSPFKDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQIS
RIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGDGPG
NAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKV
QQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQND
AGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRGRG
QGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNM
KLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPMGPY
NPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAHY
YQQQAQPPPAAPAGAPAATQTNGQGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPAGAP
PGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgccctctccttttaaagatcaaccagatgctaagaaagttgctcctcaaaatgattct
tttggaacacagttaccgccgatgcatcagcagcaaagcaggtctgtaatgacagaagaa
tacaaagtaccagatggaatggttggatttataattggtagaggaggagaacagatctca
cgcatacagcaggaatctggatgcaagattcagatagcacctgacagtggtggtcttcca
gaaaggtcttgtatgttaactggcacgccagaatctgttcaatcagcaaaacggttattg
gaccagattgttgagaaaggaagaccagctcctggcttccatcatggtgatggacctgga
aatgcagttcaagaaatcatgattccagcgagcaaggcaggattagttattggaaagggt
ggagaaactattaaacaacttcaggaaagggctggcgttaaaatggttatgattcaggat
ggaccgcagaacactggtgctgacaaacctcttaggattacaggagatccatacaaagtt
caacaagccaaagaaatggtgttagagttaattcgtgatcaaggtggtttcagagaagtt
cgaaatgagtatggatcaagaataggaggaaatgaagggatagatgtccccattccaaga
tttgctgttggcattgtaataggaagaaacggagagatgataaaaaaaatacaaaatgat
gctggtgttcgaattcagtttaagccagacgatggaacaacacctgatagaatagcacaa
ataacaggacctccagatagatgtcaacatgctgcggaaattattacagaccttcttcga
agtgttcaggctggtaatcctggtggacctggacctggtggtcgaggaagaggtagaggt
caaggcaactggaacatgggaccacctggtggactacaggaatttaatttcattgtacca
actgggaaaactggattaataataggaaaaggaggtgaaaccataaaaagtataagccaa
cagtctggtgcaagaatagaacttcagagaaatcctccacctaatgcagatcctaatatg
aagttattcacaattcgtggaactccacagcaaatagattatgctcggcaactcattgaa
gaaaagattggtggcccggtaaatcctttagggccacctgtaccccatgggccccatggt
gtcccaggcccacatgggcctcctggaccaccaggacctggaactccaatgggcccatac
aaccctgcaccttataatccaggaccacctggtcccgctcctcatggtcctccagccccc
tatgcgccccaaggatggggaaatgcgtatccacattggcagcaacaagcgcctcctgat
ccagccaaggcaggaacagatccaaattcagcagcctgggctgcttattatgcgcactat
tatcaacagcaagcacagccaccacctgcagctcctgctggtgcacccgctgcaacccaa
actaatggacaaggtgatcagcagaatccagctccagctggacaggttgattataccaag
gcttgggaagaatactataagaaaatgggtcaagcagttcctgctcccgctggggctcct
ccaggtgggcaaccagattatagtgcagcctgggctgagtactatagacaacaagcagcc
tactatgcccagacgagtccccagggaatgccacagcatcctccagcacctcagggccaa
taa
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integrated database retrieval system
