Sorex araneus (European shrew): 101542958
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Entry
101542958 CDS
T07854
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X2
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101542958 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sara03036
]
101542958 (NFRKB)
Chromosome and associated proteins [BR:
sara03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
101542958 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
101542958
NCBI-ProteinID:
XP_004614175
LinkDB
All DBs
Position
Unknown
AA seq
1291 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGDGHGARIMEDCLLGSTRVSLPEDLLEDPEIFFDVVSLSTWRE
VLSDAQREHLQQFLPRFPEDGLDQQNQLILALFRGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFKSQYKRYLSSQQQYFHRLLKQILASRSDLLETARRSGPALSLRHRRASPSRA
PEVREWRAQQRYLKVLREVKEECGDTSLSSDEEDLGSWLPSSPARSPSPAVPLRVVPTLS
TTDMKTADKIELGDSDLRTMLKKHHEKRKRQPDHPDLLTGDLTLSDIMTRVNAGRKGSLA
ALYDLAVLKKKVKEKEEKKKKKIKIIKSEVEDLAEPLSGPERLAPLSQAPSPLADPAIKE
EPLEDLKPGLGINEISSSFFSLLLEILMLEGQASLPLLEERVLDWQSSPASSLNSWFSAA
PHWAELVLPALQYLAGESRAVPSSFSPFVEFKEKTQQWKLLGQSPDNEKELAALFQLWLE
TKDQAFCKQENEDSSDATTPMPRERTDYVVRPSTGEEKRLFQEQEWHRYSQPHKAFTFRM
HGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEI
CELLRDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFE
RIHQAQAAAAKARKALQQKPRPPSKVKAGSKENVGKGLGCVTTEQSQLSLSDSGLPPTPA
TPATSTPPALPATPISPPPVVSTSKSCPGPEPAKSSPGVLLVSSPPMPQLGAMLSPTASQ
TPPASQTAARVVGHSGPAGLPQVRVVAQPSLPATPQPSAGPTQALPPMPPAPQIRTPTAT
TTQTKVVPQTVMATVPVKAPAASASGQRPGSALTVTSLPVSTASPASKPATSGPGTSAPS
ASTAAVIQNVTGQNIIKQVAITGQLGVKAQAGSSIPLTATNFRIQGKDVLRLPPSSISTD
AKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGTGSGTVGKGISATLHVHAADSPGKAGS
ASAPPSTPTGTTVVKVTPDLKPADPSSSAFRLMPALGVSVAEQKGKNTVVAASDSKPAAT
IRIVQGLGVVPPKAGQTITVAAHAKPGSSVASASGTVHPAAVSLPSVNATVSKTVAVASG
AASTPISIGPGAPAVRQVPVSNTVVSTSQAGKVPTRITVPLSVISQPMKGKSVVTAPLIK
GNLGANLGGLGRNIILTTMPAGTKFIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPAA
HLQQGTAAGSKAVSTVVVTTAPSPKQAPEQQ
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggactccctggaccacatgctgacggaccccctggagctgggcccctgtggggacggc
catggcgcccgcatcatggaggactgcctcctgggaagcactcgggtcagcctccccgag
gacctcctggaggatcccgagatattctttgacgtggtcagtctgtccacgtggcgagag
gtcctgagtgacgcgcagcgggagcacctccagcagttcctgcctcgctttcccgaggat
ggtctcgaccagcagaaccagctcatcctggctctcttccgcggggagaacttccgcttc
gggaaccctctgcacattgcccagaagctctttcgagatggacactttaaccccgaggtg
gtcaagtaccgacagctgtgcttcaagtcccagtacaagcgctacctctcctcgcagcag
cagtacttccaccggctgctgaagcagatcctggcctcgcggagcgacctcctggagaca
gcgcggcggagcggcccggccctgtccttgcggcacaggcgggcgtcaccgtcccgcgcc
cccgaggtgcgggagtggcgcgcccagcagcgctacctgaaggtcctgcgggaggtgaag
gaggagtgtggggacacgtccctgtcgtcggacgaggaggatctcggctcgtggctcccc
agctccccagcgcgttctcccagccccgcagtgcccctgcgggtggtgcccacactgtcc
actacggacatgaaaactgcagataaaatagagttgggggacagtgacttgaggacgatg
ctgaagaagcaccacgagaagcggaaacgccagccggatcacccggaccttctgacaggg
gacctgaccctcagtgacatcatgactcgggtcaacgctggcaggaagggctctctcgca
gccctgtatgacttggctgtcctgaaaaagaaggtaaaggagaaggaggagaagaagaag
aagaaaataaaaatcatcaaatccgaggtcgaggacctggcggagcctctcagtggcccg
gagcggctggccccgctgtcgcaggcaccctcgcccctggcggacccggccatcaaggag
gagcctctggaagacctcaagcccggccttggaatcaacgaaatctcttccagcttcttc
tctctcctcttggagatcttgatgctggagggacaggccagccttcccctgctggaggag
cgggttctggactggcagtcctctccggccagctcactcaacagctggttctccgcagcc
cctcactgggccgaactggtactgcccgccctgcagtatcttgccggagaaagccgggct
gtgccgtctagcttctctccctttgttgaattcaaagagaaaacccagcagtggaagttg
ctcggccagtccccggataatgagaaggagctcgctgccctcttccagctgtggctcgaa
accaaagaccaggccttctgcaagcaagaaaacgaggacagctccgatgctacaaccccc
atgccccgggaaagaaccgactacgtggtgcggcccagcacaggggaggagaagcggctc
ttccaggagcaggagtggcaccgctacagccagccccacaaggccttcaccttccgcatg
cacggcttcgagtcggtggtggggcccgtgaagggcgtgtttgacaaggagacgtcgctc
aacaaggctcgggagcactcgctgctgcgctccgaccggcccgcctacgtcaccatcctg
tccctggtccgggacgccgcggcccgattgccgaatggtgagggcacccgcgccgagatc
tgcgagctgctgagagactcccagttcctggcccccgacgtcaccagcacgcaggtgaac
acggtggtgagcggcgcgctggaccggctccactatgagaaggacccctgtgtcaagtac
gacatcggccgcaagctgtggatctacctgcatcgcgaccggagcgaggaggagttcgag
cggatccatcaggcacaggctgcggccgcaaaggccaggaaagcccttcagcagaagccc
aggcccccgtccaaggtgaaggccggcagcaaggagaacgtggggaaggggctgggctgt
gtgaccaccgagcagagccagctgagcctcagcgactcgggcctgccccccaccccagcc
acccccgcgacgtccaccccgcccgctctgcctgccacgcccatctcccctccgcccgtg
gtgtccaccagcaagagctgccccggcccggagcctgccaagtccagcccaggcgtcctt
ctggtgtcctcgccgcccatgccgcagctcggagccatgctctccccgacggccagccag
accccgcccgcctcgcagacagcggcccgcgtcgtcggccactcgggtccagctgggctg
cctcaggtgcgcgtggtggcccagcccagcctccctgccacaccacagccctcggcgggg
cccacgcaggcgctgccgccgatgccccccgcaccccagatccggacccccactgccacc
accacgcagaccaaagtcgtcccccagacagtcatggccacggttccagtcaaggccccg
gcggcatcggccagcgggcagcggcctgggtctgcgctcacggtgacgagccttcctgtc
agcaccgccagccccgccagcaagcccgccacgagcgggccggggacgtctgccccgagt
gcgtccacggcggctgtcattcagaatgtcacgggccagaacatcatcaagcaggtggca
atcactgggcagcttggtgtgaaggcccaggcgggcagcagcattccgctcacggccact
aacttccgcatccagggtaaggacgtgttgcgtctgccgccctcttccatcagcaccgac
gccaagggccagacggttctacggatcactccggacatgatggccacgctggctaagtcc
caggtcaccacagtcaaactgacccaggacctcttcgggacaggaagtggcactgtgggc
aaaggcatctctgccaccctgcacgtccacgcagcggacagccccggcaaggccggttca
gccagtgcccctccatccactccaacaggtaccaccgtggtcaaggtgacgcctgacctc
aagcctgctgacccttcaagctccgcattccgcctgatgcctgccctcggtgtgagcgtg
gcagagcagaaggggaaaaatacggtggttgctgcgtcggactctaagcccgccgccacc
atccgcatcgtgcagggcctgggcgtggtgccccccaaggcgggccagaccatcacggtg
gccgcccatgccaagccgggctcctcagtggccagtgcctctgggactgtgcatccggcg
gctgtgtccttgcccagcgtgaacgccactgtgtccaagactgtggccgtggcttcgggg
gcagccagcacccccatcagcatcgggccgggagcccccgcggtccgccaggtccccgtc
agcaacacggtcgtgtccacatcacaggctgggaaggtgccgacgcggatcacggtgcca
ctctcggtcatcagccagcccatgaagggcaagagtgtggtcacagcccccctcatcaag
ggcaacctcggcgccaacctcggcggcctgggccgcaacatcatcctcaccactatgccc
gcggggaccaagttcattgcgggcaacaagcccgtcagcttcctcacggcgcagcagctg
cagcagctacagcagcaaggccaggccacccaggtacgcatccagaccgtccccgcagcc
cacctgcagcagggcacggcggcgggctccaaagccgtctccactgtggtggtgacaacg
gccccgtctccgaaacaggcgcccgagcagcagtga
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