Sorex araneus (European shrew): 101543175
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Entry
101543175 CDS
T07854
Symbol
VPS4A
Name
(RefSeq) vacuolar protein sorting-associated protein 4A
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
sara
Sorex araneus (European shrew)
Pathway
sara03250
Viral life cycle - HIV-1
sara03272
Virion - Hepatitis viruses
sara04144
Endocytosis
sara04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101543175 (VPS4A)
03272 Virion - Hepatitis viruses
101543175 (VPS4A)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101543175 (VPS4A)
09143 Cell growth and death
04217 Necroptosis
101543175 (VPS4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sara04131
]
101543175 (VPS4A)
03400 DNA repair and recombination proteins [BR:
sara03400
]
101543175 (VPS4A)
Membrane trafficking [BR:
sara04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
101543175 (VPS4A)
DNA repair and recombination proteins [BR:
sara03400
]
Eukaryotic type
Check point factors
Other check point factors
101543175 (VPS4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
TIP49
AAA_16
AAA_22
AAA_14
AAA_5
RuvB_N
IstB_IS21
AAA_25
DUF815
AAA_17
AAA_2
AAA_18
AAA_33
NPHP3_N
RNA_helicase
nSTAND3
AAA_24
PhoH
ResIII
AAA_28
Mg_chelatase
NACHT
AAA_7
Parvo_NS1
YhdB
bpMoxR
YCII
AAA_30
Sigma54_activat
TPR_IF140_C
TPR_2
Motif
Other DBs
NCBI-GeneID:
101543175
NCBI-ProteinID:
XP_012787409
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MGLEKEAGKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK
CMQYLDRAEKLKDYLRSKEKHGKKPVKESQSESKGSDSDSEGDNPEKKKLQEQLMGAVVM
EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKA
VATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNEN
ESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAAR
AQMFRLHLGSTPHNLTEANIQLLARKTEGYSGADISVIVRDSLMQPVRKVQSATHFKKVC
GPSRTNPGMTIDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVCMSDMLRSLATTRPTVN
ADDLLKVKKFSEDFGQES
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggggctggagaaggaggccggcaaagccattgatctggtgacgaaagccacggaagag
gataaagccaagaactacgaggaggcgctccggctctaccagcatgccgtggagtatttc
cttcacgccatcaagtatgaggcgcacagcgacaaggccaaggagagcatccgcgccaag
tgcatgcagtacctagaccgggccgagaagctcaaggattacctgcggagcaaagagaag
catggcaagaagccggtcaaggagagccagagcgagagcaagggcagcgatagtgacagt
gaaggggataatccggagaaaaagaagttgcaagaacagctgatgggagccgtggtgatg
gagaagcccaacatcaggtggaatgacgtggctgggctggagggggccaaggaggccctc
aaggaagctgtcattctgcccatcaaattcccacacctgttcacgggcaagcggaccccg
tggcgtgggatactgctcttcggaccccccggcacagggaagtcctacctggccaaagca
gtggcgacagaggccaacaactccaccttcttctctgtgtcctcctcggacctgatgtcc
aagtggctgggggagagtgagaagctggtcaagaacctcttcgagctagctcggcagcac
aagccgtccatcatcttcatcgacgaggtggactccctctgcggctcccgcaacgagaac
gagagcgaggcagcgcggaggatcaagacggaattcttggtccagatgcaaggcgtgggg
aataacaacgatgggactctggtccttggtgccaccaacatcccctgggtgctggactcc
gccatcaggaggaggtttgaaaagcggatttatatcccattgcccgaggaagctgcccgc
gcccagatgttccggctccacctggggagcaccccccacaacctcaccgaagccaacatc
cagctgctggcccggaagacggaaggttactcgggcgccgacatcagcgtcatcgtgcgg
gactcgctcatgcagcccgtcaggaaagtgcagtccgccactcacttcaaaaaggtgtgt
ggcccctcccgcaccaaccctggcatgaccatcgatgacctgctgaccccttgctcgccg
ggggacccgggggccatcgagatgacctggatggatgtccctggtgacaaactcttagag
cctgtggtctgcatgtcggacatgctccggtccttggccaccacccggcccaccgtgaat
gccgacgatctcctgaaagtgaagaaattctcagaggactttggacaggagagttag
DBGET
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