Sorex araneus (European shrew): 101543286
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Entry
101543286 CDS
T07854
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
sara
Sorex araneus (European shrew)
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sara04515
]
101543286 (DSCAML1)
Cell adhesion molecules [BR:
sara04515
]
Immunoglobulin superfamily
DSCAM family
101543286 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
Receptor_2B4
Interfer-bind
V-set_CD47
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
101543286
NCBI-ProteinID:
XP_004605124
LinkDB
All DBs
Position
Unknown
AA seq
1904 aa
AA seq
DB search
MGTRPEDVGSSLYFVNASVQHVTFSSSVGVVVPCPAAGSPSAALRWYLATGDDIYDVPHI
RHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENAAGKIRSPDIRVKAVFREPYTVRVED
QRSMRGSVAVFKCLIPSSVQEYVSVVSWEKDTVPITPENRFFITAHGGLYISDVQKEDAL
STYRCITKHKYSGETXXXDGATHLLCLPDPAESVPTILDGFHSQEVRAGLTVELPCTASG
YPLPAIRWLKDGRPLPADSRWTKRITGLSISALRAEDSGAYICEVTNTFGSAEVTGTLTV
VDPLHVTLTPKKLKTGIGSTVILSCALMGSPEFSIRWYRNTELLRPDEAVSIRGLSNETL
LIASAQKSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIVSSFSEKVVNPGEQFSLMCAA
KGAPPPTVTWALDDEPLERDSSHRTSQFTMSDGTTISHMNVTGPQIRDGGVYRCTARNSV
GSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYKDALLLPDNHRQ
VVFENGTLKLSDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPFEFPPASIGQ
LLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIA
SNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGN
PQQYHPVPLTGRIQVLPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMI
TSHPNTTIAIKGQAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIATKDNGDEVVST
LKLQPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRF
DGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIRMYSFNKIGRS
EPSKELTVSTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSP
GSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPS
QPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQNITTTRER
VELRGMEKFTNYSVQVLAYTQAGDGVRSGVLYIQTKEDVPGPPAGIKAVPSSASSVVVSW
LPPAKPNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQYLLWVAAVTSA
GRGNSSDKVTIEPAGKAPAKIISFGGTVTTPWMRDVRLPCNSVGDPAPAVKWTKDSEHLP
IPTSMDGHRLIHTNGTLLLRAVRAEDSGYYTCTATNTGGFDTIIVNLLVQVPPDQPRLTV
SKTSASSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSGERAFKLDGLQCGTWY
KVKLAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWNNGGCPIT
AITLEFRPKGAWAWQGLRANSSAEVFLTELREATWYELRMRACNSAGCGNETAQFATLDY
DGSTIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFIVRKKRKEKRLKRLRDAKSLA
EMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATIPVTDAEFSQ
AVNPQSFCTGVSLHHPALIQSSGPLIDMSDIRPGTNPVSRKNVKSTHSTRNRYSSQWTLT
KCQASTPARTLASDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVSTESASSTYEEL
ARAYEHAKLEEQLQHAKFEITECFVSDSSSDQMTTGTNENADSMTSVSTPSEPGICRFTA
SPPKPQDADRGKNVAVPIPHRANKSEWARHLPGGGTPCLRRDPG
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggggacccgccccgaggatgtcggcagcagcctctactttgtgaatgcctccgtgcag
cacgtgaccttctccagctccgtgggcgtggtggtgccctgcccggccgccggctccccc
agcgcggcccttcgatggtacctggccacaggggacgacatctacgacgtgccgcacatc
cggcacgtgcacgccaacggcacgctgcagctctaccccttctcgccctccgccttcaac
agcttcattcacgacaatgactacttctgtaccgcggagaatgcggccggcaagatccga
agccccgacatccgcgtcaaagcagttttcagggaaccctacacggtccgggtggaggat
caaaggtcaatgcgtggcagcgtggccgtcttcaagtgcctcatcccctcctccgtgcag
gaatacgtgagcgtggtgtcctgggagaaggacacagtccccatcaccccagaaaacagg
ttttttattactgcccacggcgggctgtacatctccgacgtgcagaaggaggacgccctg
tccacctaccgctgcatcaccaagcacaagtacagcggggagacnnnnnnnntggacggg
gccactcacctcctctgccttccagatcctgccgagtccgtccccaccatcctggacggc
ttccactcccaggaggtgagggctggcctcacggtggagctgccctgcacggcctccggc
tacccgctcccggccatccgctggctgaaggacggccggcccctcccggctgacagccgc
tggaccaagcgcatcacaggcctgagcatcagcgccctgcgggccgaggacagcggcgcc
tacatctgcgaggtcaccaacaccttcggctctgccgaggtcaccggcaccctcacggtg
gtcgacccccttcacgtgaccctgaccccgaagaagctgaagacgggcatcggcagcacc
gtcatcctctcgtgcgcgctcatgggctccccagaattctccatccgctggtaccgcaac
acggagctgctgcggcctgatgaggccgtgtccatccgcgggctcagcaacgagactctg
ctcatcgcgtctgcccagaagagccactccggggcctaccagtgcttcgccacccgcaag
gcccagacagcccaggacttcgccattattgtgctggaggacggcacgccccgcatcgtc
tcgtccttcagcgagaaggtggtgaaccccggggagcagttctcgctgatgtgtgcggcc
aagggcgccccgccccctacggtcacctgggcgctggacgacgagcccctggagcgggac
agcagccaccgcaccagccagttcaccatgtcggacggcaccaccatcagccacatgaac
gtcacgggcccccagatccgcgacgggggcgtgtaccggtgcacggcgcggaactcggtg
ggcagtgctgagtaccaggcgcgaataaacgtaagaggaccccccagcatccgggccatg
aggaacatcacggcggtggccgggcgggacaccctgatcaactgcagagtcatcggctac
ccctactactccatcaagtggtacaaggacgcgctgctgctgcccgacaaccaccgccag
gtggtgttcgagaacggcaccctgaagctcagcgacgtgcagaagggcatggacgagggc
gagtacctgtgcagcgtgctcatccagccccagctctccatcagccagagcgtgcacgtg
gccgtcaaagtgccccctctcatccagcccttcgagttcccacccgcctccatcggccag
ctgctgtacatcccttgcgtggtgtcctcgggggacatgcccatccgcatcacgtggaga
aaggacggccaggtgatcatctcgggctcgggcgtgaccatcgagagcaaagagttcatg
agctcgctgcagatctccagcgtctccctcaagcacaacggcaactacacgtgcatcgct
agcaacgcggccgccaccgtcagccgggagcggcagctgattgtgcgcgtgcccccccgg
tttgtggtccagcccaacaaccaggatggcatctacggcaaggctggggtgctcaactgc
tccgtggacggctaccccccgcccaaggtcatgtggaaacatgccaaggggagcgggaac
ccccagcagtaccacccagtgcccctcaccggccgcatccaggtgctgcccaacagctcg
ctgctgatccgccacgtcctggaagaggacatcggctactacctctgccaggccagcaac
ggcgtgggcacggacatcagcaagtccatgttcctcacggtcaagatcccggccatgatc
acctcccaccccaacaccaccatcgccatcaagggccaggccaaggagctgaactgcacg
gcgcgcggcgagcggcccatcatcatccgctgggagaagggggacacggtcatcgacccc
gaccgcgtcatgcgctacgccatcgccaccaaggacaatggcgacgaggtggtgtccacg
ctgaagctccagccggccgaccgcggggattccgtgttcttcagctgccacgccatcaac
tcctacggggaggaccggggcctgatccagctcactgtgcaagagcccccagaccccccg
gagctggagatccgggaggtgaaggcccggagcatgaacttgcgctggacgcagcgtttt
gatgggaacagcatcatcaccggctttgacatcgagtacaagaacaagtcagattcctgg
gacttcaagcagtccacgcgcaacatctcccccaccatcaaccaggccaacatcgtggac
ttgcacccggcgtccgtgtatagcatccgcatgtactccttcaacaagattggccgcagc
gagccgagcaaggagctcaccgtcagcacggaggaggcagctcctgacggcccccccatg
gatgtcaccttgcagccagtgacgtcacagagcatccaggtgacctggaaggcccccaag
aaggagctgcagaacggcgtgatccggggctaccagatcggctaccgggagaacagccct
ggcagcaacgggcagtacagcatcgtggagatgaaggccacgggagacagcgaggtctac
accctggacaacctcaagaagttcgcccagtatggggtggtggtacaggccttcaaccgg
gccggcacggggccctcgtccagcgagatcaatgccaccaccctggaggacgtgcccagc
cagccccccgagaacgtgcgggccctgtccatcacctccgacgtggccgtgatctcgtgg
tcggagccccctcgcagcaccctcaacggcgtcctcaaaggatacagggtcatcttctgg
tccctctacgtggacggcgaatggggagagatgcagaacatcaccacgacacgggagcgg
gtggagctgcggggcatggagaagttcaccaactacagcgtccaggtgctggcctacacg
caggcgggggatggagtgcgcagcggggtcctctacatccagaccaaggaggacgttcca
ggtccccccgccggcatcaaagccgtcccttcctccgccagcagcgtggtggtctcctgg
ctgccccccgccaagcccaacggggtcatccgcaagtacaccatcttctgctccagcccc
ggctctggccagccggcgcccagcgagtacgagaccagcccggagcagctgttctaccgc
atcgcccacctgaaccgcgggcagcagtacctgctgtgggtggccgccgtcacctcggcc
ggccggggcaacagcagcgacaaggtcaccatcgagcccgctggcaaggcccctgccaag
atcatctcgttcgggggcaccgtgacgacgccgtggatgagagacgtgcggctgccctgc
aactcggtgggcgacccagcgcccgctgtgaagtggaccaaggacagcgagcacctgccc
atccccacgtccatggacgggcaccggctcatccacaccaacggcacgttgctgctgcgc
gcggtcagggccgaggactcgggctactacacctgcaccgccaccaacaccggcggcttc
gacaccatcatcgtcaacctcctggtgcaggtgccccctgaccagccccgcctcacggtc
tccaagacctccgcctcgtccatcaccctgacctggatcccgggggacaacggcggcagc
tccatccgcggcttcgtgctgcagtactccgtggacaacagcgaggagtggaaggacgtg
ttcatcagctcgggcgagcgcgccttcaagctggacgggctgcagtgcggcacgtggtac
aaggtcaagctggccgccaagaacagcgtgggctcgggccgcatcagcgagatcatcgag
gccaagacccacgggcgggagccctctttcagcaaggaccagcaccttttcacgcacatc
aactccacgcacgcgcgcctcaacctgcagggctggaacaacggcggctgccccatcacg
gccatcacgctcgagttccggcccaagggcgcctgggcctggcaggggctgcgcgccaac
agctcggccgaggtcttcctcaccgagctgcgcgaggccacgtggtacgagctgcgcatg
cgcgcctgcaacagcgcgggctgcggcaacgagacggcgcagttcgccacgctggactac
gacggcagcaccatcccccccatcaagtccgcccagggggagggggacgacgtgaagaag
ctcttcaccatcggctgcccggtcatcctggccacactgggggtggccctgctcttcatc
gtccgcaagaagaggaaggagaagaggctgaagcggctccgagatgccaagagtctggca
gaaatgctgatcagcaagaacaaccggagcttcgacacccccgtgaaggggccgccgcag
gggccacggctccacatcgatatcccccgggtccagctgctcatcgaggacaaggagggc
atcaagcagctgggagatgacaaggccaccatccccgtgaccgacgccgagttcagccaa
gccgtcaacccgcagagtttctgcacgggggtgtcgctgcaccacccggccctcatccag
agctcagggcctctcatcgacatgtcggacatccggccgggcaccaacccggtgtccagg
aagaacgtgaagtccacacacagcacccggaaccgctactccagccagtggacgctcacc
aagtgtcaggcgtccacccccgcccgcaccctcgcctctgactggcgcacggtgggctct
cagcatggagtgaccgtcaccgagagtgacagctacagcgccagcctctcgcaggatacg
gacaagggacggaacagcatggtgtccaccgagagcgcgtcctccacctacgaggagctg
gcgcgggcttacgagcacgccaagctggaggagcagctgcagcacgccaagttcgagatc
accgagtgcttcgtctccgacagctcctcggaccagatgaccacgggcaccaacgagaac
gccgacagcatgacgtccgtgagcacgccctccgagccgggcatctgccgcttcaccgcc
tccccgcccaagccccaggacgccgaccggggcaagaacgtggctgtgcccatccctcac
cgggccaacaagagtgagtgggcacgccacctccccggcgggggcaccccgtgtctgcgc
cgagacccaggctag
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integrated database retrieval system
