Sorex araneus (European shrew): 101543481
Help
Entry
101543481 CDS
T07854
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
sara
Sorex araneus (European shrew)
Pathway
sara04068
FoxO signaling pathway
sara05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
sara00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
101543481 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
101543481 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sara04121
]
101543481 (RAG1)
Enzymes [BR:
sara01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101543481 (RAG1)
Ubiquitin system [BR:
sara04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101543481 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_UBOX
zf-RING_10
zf-C3HC4_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
101543481
NCBI-ProteinID:
XP_004607968
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MAVSLPPTLALSPPPDEIQHPYLKFSEWKFKLFRVRSLEKAPEEAPVEKNASSEEKLSLQ
KSLTAPDKAEGLKPAPTQPALKPQPKFLKKSHGHGKARDKAIHQANLRQLCRICGNSFKA
IGHKRRYPVHGPVDGKTQGLLRKKEKRVTSWPDLIAKVFRIDVKADIDSVHPTEFCHHCW
SLMHRKFRSGSWEVHLPRSATREWRPHTTSCDICCAAHRGLKRKSQQPNAQLSKKLKTVI
DKARQARQRRRRAQAGLRRKEVLKKISDCSKVHLSTKLLALDFPAHFVKSISCQICEHIL
TDPVETSCKHVFCRTCILRCLKVLGSYCPSCSYPCFAMDLESPAKSFLSILNSLLVRCPA
KECKEEVSLQKYNHHISSHKDSKETLVHINKGGRPRQHLLSLTRRAQKHRLRELKMQVKA
FADKEEGGDVKSVCLTLFLLALRARNEHRQADELEALMQGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRSAEKVLLPGYHAFEWQPPLKNVSSSTDVGIIDG
LSGLASSVDEYPVDTIAKRFRYDAALVSALMDMEEDILDGLRAQDVEDYLDGPFTVVVKE
SCDGMGDVSEKHGSGPAVPEKAVRFSFTIMRITVARGGGGGEVTVFEEAKPNSELCCKPL
CLMLADESDHETLTAILSPLIAEREAMKGSQLRLELGGLPRAFRFRFRGTGYDEKLVREV
EGLEASGSVYICTLCDATRLEASQNLVFHSITRSHGENLQRYELWRSNPYHESAEELRDR
VKGVSAKPFIETVPSIDALHCDIGNAAEFYKLFQLEIGEAYRQPHAGKEERKRWQATLDK
HLRKRMNLKPIMRMNGNFARKLMTRETVEAVCELVPCPERHEALRELMDLYLKMKPVWRS
SCPAQECPDALCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGA
WASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHKALKKTGFL
MNSQASDRDPLGLEDSLDLQDSMEF
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctttgccacccaccctggcactcagtcctccccctgatgaaatccagcac
ccataccttaaattttcagagtggaaatttaagctcttcagggtgagatctttggaaaaa
gcacctgaagaagctccagtggaaaagaatgcttcctctgaggagaaactttctcttcag
aagtctctgaccgccccagacaaggctgaaggtctgaagccggccccgactcaaccagct
ttgaaaccccaacccaaattcctgaagaaatcccacggtcatgggaaagcaagagacaaa
gcaatccaccaagccaacctccgacaactctgccgcatctgtgggaattctttcaaagcc
attggccacaagaggagatacccggtccacgggcctgtggatgggaagacccaaggcctc
ttgcggaagaaagaaaagagagtcacttcctggccagacctcattgccaaggttttccga
attgatgtgaaagcggacatcgattctgtgcaccccaccgaattctgccaccactgttgg
agcctcatgcacaggaagtttcgcagtggctcctgggaggtgcacctccccaggagtgcc
accagggagtggcgcccacacacaacgtcttgtgacatctgctgtgctgcccaccgggga
ctcaagaggaagagtcagcagcccaatgcgcagctcagcaaaaagctcaaaactgtgatt
gacaaggcaaggcaagcccgtcagcgcaggcgcagagctcaggcagggctccgcaggaag
gaagtcctgaagaagatctccgactgcagcaaggtgcatctcagtaccaagctccttgcc
ctggacttccccgcacacttcgtgaaatccatctcctgccagatctgcgaacacattctg
actgacccagtggagaccagctgcaaacatgtcttttgcaggacctgcattctcagatgt
ctcaaagtcctgggcagttattgcccttcttgcagctacccctgctttgccatggacctg
gagagtccagcgaagtctttcctgagtatcctgaattccctgctggtgaggtgtcccgcc
aaagaatgcaaggaggaggtcagcttgcaaaaatataatcaccacatctccagccacaag
gactcgaaagagactctggtgcatatcaataaaggaggccggccccgccagcatctcctc
tccctcacccggcgggctcagaagcaccggctcagggagctcaagatgcaagtcaaggct
tttgccgacaaagaggaagggggtgacgtgaagtccgtgtgcctgaccctgttcctgctg
gccctgcgggcgaggaatgagcaccgacaggcggacgagctggaggccctgatgcagggc
cgcggctccggtctgcagccagccgtctgcttggccatccgcgtcaacaccttcctcagc
tgcagccagtaccacaagatgtaccggacggtgaaagccatcacgggcaggcagattttc
cagcccctgcacgccctgcggagcgccgagaaggtcctgctgccggggtaccacgccttc
gagtggcagcccccgctgaagaacgtctcctccagcacggacgtgggcatcatcgacggc
ctgtcgggcctggcctcgtccgtggacgagtacccggtggacaccatcgccaagcgcttc
cgctacgacgcggccctggtgtcggccctgatggacatggaggaggacatcctggacggc
ctgagagcccaggacgtggaggactacctggacggccccttcaccgtggtggtgaaggag
tcgtgcgacggcatgggcgacgtgagcgagaagcacggcagcggcccggccgtgcccgag
aaggccgtccgcttctccttcaccatcatgcgcatcaccgtggcgcgcggcggcggcggc
ggcgaggtgacggtgttcgaggaggccaagcccaactcggagctgtgctgcaagcccctg
tgcctcatgctggccgacgagtcggaccacgagacgctgacggccatcctgagcccgctc
atcgccgagcgcgaggccatgaagggcagccagctgcggctggagctgggcgggctgccg
cgcgccttccgcttccgcttccggggcacgggctacgacgagaagctggtgcgcgaggtg
gagggcctggaggcgtcgggctccgtgtacatctgcacgctgtgcgacgccacgcgcctg
gaggcctcgcagaacctggtcttccactccatcacgcggagccacggcgagaacctgcag
cgctacgagctgtggcgctccaacccctaccacgagtcggccgaggagctgcgcgaccgc
gtcaagggcgtgtcggccaagcccttcatcgagaccgtgccgtccatcgacgcgctccac
tgcgacatcggcaacgcggccgagttctacaagctcttccagctggagatcggggaggcg
taccggcagccgcacgccggcaaggaggagcgcaagcgctggcaggccacgctggacaag
cacctgcgcaagaggatgaacctgaagcccatcatgcgcatgaacggcaacttcgcccgc
aagctcatgacgcgcgagacggtggaggccgtctgcgagctcgtgccctgccccgagcgg
cacgaggccctgcgggagctcatggacctctacctgaagatgaaacccgtgtggcgctcc
tcctgccccgcgcaggagtgccccgacgccctctgccagtacagcttcaactcgcagcgc
ttcgccgagctcctctccaccaagttcaagtaccgctacgagggcaagatcaccaattat
ttccacaagacgctggcccacgtgccggagatcatcgagagagacggctccatcggggcc
tgggccagcgagggcaacgagtccggcaacaagctgttcaggcgcttccgcaagatgaac
gcccggcagtcgaagtgctacgagatggaggacgtgctcaagcaccactggctgtacacc
tccaaatacctgcagaagtttatgaatgcgcacaaggcgttaaagaaaacgggctttctc
atgaactcgcaggcgagcgacagggacccgttaggcttagaggactctctggacctgcag
gattcaatggagttttaa
DBGET
integrated database retrieval system
